RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 DGCR6Q14129 220 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 RALGPS1Q5JS13 557 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 ACAD10Q6JQN1 1059 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 ENOSF1Q7L5Y1 443 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 TMC7Q7Z402 723 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 SPATA18Q8TC71 538 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 EXT2Q93063 718 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 C12orf43Q96C57 262 aaKnown RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 GANQ9H2C0 597 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 PCDH9Q9HC56 1237 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 USP21Q9UK80 565 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 ITGA11Q9UKX5 1188 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 KANSL1LA0AUZ9 987 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 TMEM114B3SHH9 223 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 CDH2P19022 906 aaPredicted RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 SLC16A2P36021 539 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 IL6STP40189 918 aaPredicted RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 ACTR2P61160 394 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 GPSM2P81274 684 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 YWHAHQ04917 246 aaPredicted RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 ZBED5Q49AG3 693 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 N4BP2L1Q5TBK1 243 aaPredicted RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 PDZD4Q76G19 769 aaPredicted RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 CCDC28AQ8IWP9 274 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.54□□□□□ -0.72
CD28-202ENST00000374481 TDRD5Q8NAT2 981 aaKnown RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 PHF21AQ96BD5 680 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 SGF29Q96ES7 293 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 CEP95Q96GE4 821 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 CIB1Q99828 191 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 VPS33BQ9H267 617 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 C12orf65Q9H3J6 166 aaKnown RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 HIPK3Q9H422 1215 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 WBP11Q9Y2W2 641 aaKnown RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 ARPC4-TTLL3A0A0A6YYG9 625 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 M0QX08 132 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 SNAP23O00161 211 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 ADSSP30520 456 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 DPYSQ14117 519 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 DMC1Q14565 340 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 GPR162Q16538 588 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 LLGL2Q6P1M3 1020 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 CYP4V2Q6ZWL3 525 aaPredicted RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 POLNQ7Z5Q5 900 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 APBB2Q92870 758 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 UTP4Q969X6 686 aaKnown RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 ARPC5LQ9BPX5 153 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 DHX35Q9H5Z1 703 aaKnown RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 PAK5Q9P286 719 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 STXBP5LQ9Y2K9 1186 aa10.54□□□□□ -0.72
CD28-202ENST00000374481 FAM32AQ9Y421 112 aaKnown RBP10.54□□□□□ -0.72
CD28-202ENST00000374481 A0A1W2PPW3 197 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 DDX3YO15523 660 aaKnown RBP10.53□□□□□ -0.72
CD28-202ENST00000374481 SH3BP5O60239 455 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 ZSCAN5DPP0CG00 497 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 CDH6P55285 790 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 BNC1Q01954 994 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 TAF12Q16514 161 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 CRTC3Q6UUV7 619 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 HDDC2Q7Z4H3 204 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 MAGEE2Q8TD90 523 aaPredicted RBP10.53□□□□□ -0.72
CD28-202ENST00000374481 CLEC4MQ9H2X3 399 aaPredicted RBP10.53□□□□□ -0.72
CD28-202ENST00000374481 TUFT1Q9NNX1 390 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 ERVK-11Q9UQG0 969 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 BAZ2BQ9UIF8 2168 aaKnown RBP10.53□□□□□ -0.72
CD28-202ENST00000374481 TRPC5OSA6NMA1 111 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 RXRGP48443 463 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 TYSND1Q2T9J0 566 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 KLHL12Q53G59 568 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 KCNT1Q5JUK3 1230 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 GPATCH4Q5T3I0 446 aaKnown RBP10.53□□□□□ -0.72
CD28-202ENST00000374481 KRT28Q7Z3Y7 464 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 CYP2U1Q7Z449 544 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 FBXO11Q86XK2 927 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 RYBPQ8N488 228 aaPredicted RBP10.53□□□□□ -0.72
CD28-202ENST00000374481 PCDH20Q8N6Y1 951 aaKnown RBP10.53□□□□□ -0.72
CD28-202ENST00000374481 EXD1Q8NHP7 514 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 HDAC2Q92769 488 aaKnown RBP10.53□□□□□ -0.72
CD28-202ENST00000374481 VPS39Q96JC1 886 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 QKIQ96PU8 341 aaKnown RBP eCLIP10.53□□□□□ -0.72
CD28-202ENST00000374481 MECRQ9BV79 373 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 TEX13BQ9BXU2 312 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 CACNA2D2Q9NY47 1150 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 TAS2R14Q9NYV8 317 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 MKL2Q9ULH7 1088 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 FAM205AQ6ZU69 1335 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 A0A1B0GW55 424 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 ANKRD63C9JTQ0 380 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 NBNO60934 754 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 NOS1APO75052 506 aaPredicted RBP10.53□□□□□ -0.72
CD28-202ENST00000374481 LDLRP01130 860 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 DUX4L2P0CJ85 424 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 DUX4L3P0CJ86 424 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 DUX4L4P0CJ87 422 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 DUX4L5P0CJ88 424 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 DUX4L6P0CJ89 424 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 DUX4L7P0CJ90 424 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 GM2AP17900 193 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 PHKA2P46019 1235 aa10.53□□□□□ -0.72
CD28-202ENST00000374481 CDH15P55291 814 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms