RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 SETDB1Q15047 1291 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 DPYSL2Q16555 572 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 ZNF467Q7Z7K2 595 aaPredicted RBP24.69■■□□□ 1.54
CDK9-201ENST00000373264 FLRT1Q9NZU1 646 aa24.69■■□□□ 1.54
CDK9-201ENST00000373264 IQANK1A0A1B0GTG1 560 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 A6NJR5 290 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 SMAPO00193 183 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 VAV1P15498 845 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 BEX3Q00994 111 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 PREPLQ4J6C6 727 aaPredicted RBP24.68■■□□□ 1.54
CDK9-201ENST00000373264 ARHGAP17Q68EM7 881 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 DENND5BQ6ZUT9 1274 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 SLC26A9Q7LBE3 791 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 APOPT1Q96IL0 206 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 ZNF395Q9H8N7 513 aaPredicted RBP24.68■■□□□ 1.54
CDK9-201ENST00000373264 DTLQ9NZJ0 730 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 MORF4L1Q9UBU8 362 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 TM9SF1O15321 606 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 CES4AQ5XG92 561 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 OLFML2BQ68BL8 750 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 NCBP2-AS2Q69YL0 99 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 CTU1Q7Z7A3 348 aaKnown RBP24.68■■□□□ 1.54
CDK9-201ENST00000373264 CENPIQ92674 756 aaPredicted RBP24.68■■□□□ 1.54
CDK9-201ENST00000373264 FAM149B1Q96BN6 582 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 SLC13A1Q9BZW2 595 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 DERAQ9Y315 318 aa24.68■■□□□ 1.54
CDK9-201ENST00000373264 RALGAPA2Q2PPJ7 1873 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 MEIS3P2A8K0S8 358 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 SETSIPP0DME0 302 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 SNX17Q15036 470 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 UBXN11Q5T124 520 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 CYB561D2O14569 222 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 DHRS4L1P0CG22 281 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 PTPN9P43378 593 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 BCAT1P54687 386 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 ADIGQ0VDE8 80 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 SLC45A4Q5BKX6 768 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 SMYD5Q6GMV2 418 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 SLC26A11Q86WA9 606 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 UNC93AQ86WB7 457 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 DEFB106AQ8N104 65 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 SLC7A6OSQ96CW6 309 aaPredicted RBP24.67■■□□□ 1.54
CDK9-201ENST00000373264 SIGLEC10Q96LC7 697 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 ZFP42Q96MM3 310 aa24.67■■□□□ 1.54
CDK9-201ENST00000373264 SRPK1Q96SB4 655 aaKnown RBP24.67■■□□□ 1.54
CDK9-201ENST00000373264 UBQLN1Q9UMX0 589 aaKnown RBP24.67■■□□□ 1.54
CDK9-201ENST00000373264 HMX2A2RU54 273 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 SLC18A2Q05940 514 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 WLSQ5T9L3 541 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 PLEKHH3Q7Z736 793 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 PIGZQ86VD9 579 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 USP6NLQ92738 828 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 SNX25Q9H3E2 840 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 CPA4Q9UI42 421 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 F2P00734 622 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 MRPS5P82675 430 aaKnown RBP24.66■■□□□ 1.54
CDK9-201ENST00000373264 RIPK1Q13546 671 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 OTUD1Q5VV17 481 aaPredicted RBP24.66■■□□□ 1.54
CDK9-201ENST00000373264 STK32AQ8WU08 396 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 TSSK1BQ9BXA7 367 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 VPS11Q9H270 941 aa24.66■■□□□ 1.54
CDK9-201ENST00000373264 FBXO6Q9NRD1 293 aaPredicted RBP24.66■■□□□ 1.54
CDK9-201ENST00000373264 CCDC195A0A1B0GUA6 201 aa24.65■■□□□ 1.54
CDK9-201ENST00000373264 ALADP13716 330 aa24.65■■□□□ 1.54
CDK9-201ENST00000373264 TSHRP16473 764 aa24.65■■□□□ 1.54
CDK9-201ENST00000373264 AFF1P51825 1210 aaKnown RBP24.65■■□□□ 1.54
CDK9-201ENST00000373264 CCL14Q16627 93 aa24.65■■□□□ 1.54
CDK9-201ENST00000373264 MROH9Q5TGP6 573 aa24.65■■□□□ 1.54
CDK9-201ENST00000373264 IQSEC1Q6DN90 963 aa24.65■■□□□ 1.54
CDK9-201ENST00000373264 VPS52Q8N1B4 723 aa24.65■■□□□ 1.54
CDK9-201ENST00000373264 CRYBG2Q8N1P7 616 aa24.65■■□□□ 1.54
CDK9-201ENST00000373264 IL1RAPL1Q9NZN1 696 aa24.65■■□□□ 1.54
CDK9-201ENST00000373264 USP3Q9Y6I4 520 aa24.65■■□□□ 1.54
CDK9-201ENST00000373264 MFSD11O43934 449 aa24.64■■□□□ 1.54
CDK9-201ENST00000373264 NEFHP12036 1026 aa24.64■■□□□ 1.54
CDK9-201ENST00000373264 GTF2A2P52657 109 aa24.64■■□□□ 1.54
CDK9-201ENST00000373264 OLIG2Q13516 323 aa24.64■■□□□ 1.54
CDK9-201ENST00000373264 DCAF6Q58WW2 860 aa24.64■■□□□ 1.54
CDK9-201ENST00000373264 SYPL2Q5VXT5 272 aa24.64■■□□□ 1.54
CDK9-201ENST00000373264 HFE2Q6ZVN8 426 aa24.64■■□□□ 1.54
CDK9-201ENST00000373264 APPL2Q8NEU8 664 aa24.64■■□□□ 1.54
CDK9-201ENST00000373264 KCNK13Q9HB14 408 aa24.64■■□□□ 1.54
CDK9-201ENST00000373264 NRCAMQ92823 1304 aa24.64■■□□□ 1.54
CDK9-201ENST00000373264 CFAP69A5D8W1 941 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 RRN3P2A6NIE6 340 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 RFPL1O75677 317 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 APOEP02649 317 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 AMHP03971 560 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 SULT1E1P49888 294 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 MFSD10Q14728 455 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 TTC39BQ5VTQ0 682 aaPredicted RBP24.64■■□□□ 1.53
CDK9-201ENST00000373264 CDKL3Q8IVW4 592 aaPredicted RBP24.64■■□□□ 1.53
CDK9-201ENST00000373264 ADGRF2Q8IZF7 708 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 RNF169Q8NCN4 708 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 ADAM32Q8TC27 787 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 GTF3C2Q8WUA4 911 aaPredicted RBP24.64■■□□□ 1.53
CDK9-201ENST00000373264 ALKBH8Q96BT7 664 aaKnown RBP24.64■■□□□ 1.53
CDK9-201ENST00000373264 PNPLA8Q9NP80 782 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 TXLNGQ9NUQ3 528 aa24.64■■□□□ 1.53
CDK9-201ENST00000373264 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms