RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 GPD1P21695 349 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 SLC25A3Q00325 362 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 KCTD2Q14681 263 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 SURF1Q15526 300 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 MMEL1Q495T6 779 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 TMEM259Q4ZIN3 620 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 GALNT4Q8N4A0 578 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 NRG4Q8WWG1 115 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 DDX1Q92499 740 aaKnown RBP12.5□□□□□ -0.41
NCDN-202ENST00000373243 CPT1BQ92523 772 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 SELENONQ9NZV5 590 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 CSADQ9Y600 493 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 COMMD10Q9Y6G5 202 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 A0A0B4J269 797 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 ONECUT3O60422 494 aaPredicted RBP12.5□□□□□ -0.41
NCDN-202ENST00000373243 CDK16Q00536 496 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 LY6KQ17RY6 165 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 PARP6Q2NL67 630 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 SPDYE2Q495Y8 402 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 PTPN20Q4JDL3 420 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 MSS51Q4VC12 460 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 SCUBE3Q8IX30 993 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 STKLD1Q8NE28 680 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 CLEC4DQ8WXI8 215 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 SEPT1Q8WYJ6 367 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 TFAP2BQ92481 460 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 INPP5DQ92835 1189 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
NCDN-202ENST00000373243 HOXC10Q9NYD6 342 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 PAK5Q9P286 719 aa12.5□□□□□ -0.41
NCDN-202ENST00000373243 A8MXQ7 604 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 ENO3P13929 434 aaPredicted RBP12.49□□□□□ -0.41
NCDN-202ENST00000373243 IVDP26440 423 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 SOX11P35716 441 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 SERPINB8P50452 374 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 HSD17B4P51659 736 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 SLC12A2P55011 1212 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 MED21Q13503 144 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 UBAP2LQ14157 1087 aaKnown RBP12.49□□□□□ -0.41
NCDN-202ENST00000373243 PLEKHA7Q6IQ23 1121 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 RNF135Q8IUD6 432 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 SAMD3Q8N6K7 520 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 GATA6Q92908 595 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 HPDLQ96IR7 371 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 VCPIP1Q96JH7 1222 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 CCDC134Q9H6E4 229 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 TLK1Q9UKI8 766 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 ACTL7BQ9Y614 415 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 PTPRJQ12913 1337 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 E9PBE3 544 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 EIF3FO00303 357 aaPredicted RBP12.49□□□□□ -0.41
NCDN-202ENST00000373243 KLHL41O60662 606 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 PSMG1O95456 288 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 C4BPAP04003 597 aaKnown RBP12.49□□□□□ -0.41
NCDN-202ENST00000373243 HMGCRP04035 888 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 GARSP41250 739 aaKnown RBP12.49□□□□□ -0.41
NCDN-202ENST00000373243 EFNA5P52803 228 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 WNT7BP56706 349 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 ART3Q13508 389 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 ACSBG2Q5FVE4 666 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 FAM172AQ8WUF8 416 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 CPB2Q96IY4 423 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 OSBPL10Q9BXB5 764 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 IL1RAPL1Q9NZN1 696 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 C2CD2LO14523 706 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 GSC2O15499 205 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 USP12O75317 370 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 CCNB1P14635 433 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 DPEP1P16444 411 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 STIP1P31948 543 aaKnown RBP12.49□□□□□ -0.41
NCDN-202ENST00000373243 OGDHQ02218 1023 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 PTPN11Q06124 597 aaPredicted RBP12.49□□□□□ -0.41
NCDN-202ENST00000373243 C16orf72Q14CZ0 275 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 SMUG1Q53HV7 270 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 RNASEH2BQ5TBB1 312 aaKnown RBP12.49□□□□□ -0.41
NCDN-202ENST00000373243 EFCAB12Q6NXP0 572 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 PATL1Q86TB9 770 aaKnown RBP12.49□□□□□ -0.41
NCDN-202ENST00000373243 PHF13Q86YI8 300 aaPredicted RBP12.49□□□□□ -0.41
NCDN-202ENST00000373243 APOPT1Q96IL0 206 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 LRGUKQ96M69 825 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 CADM1Q9BY67 442 aaKnown RBP12.49□□□□□ -0.41
NCDN-202ENST00000373243 ACSS3Q9H6R3 686 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 ANLNQ9NQW6 1124 aa12.49□□□□□ -0.41
NCDN-202ENST00000373243 RABL2AQ9UBK7 228 aaPredicted RBP12.49□□□□□ -0.41
NCDN-202ENST00000373243 TM9SF1O15321 606 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 B4GALT5O43286 388 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 LYPLA1O75608 230 aaPredicted RBP12.48□□□□□ -0.41
NCDN-202ENST00000373243 TMEM63AO94886 807 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 VNN1O95497 513 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 PHKA2P46019 1235 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 EIF2B2P49770 351 aaKnown RBP12.48□□□□□ -0.41
NCDN-202ENST00000373243 HDAC4P56524 1084 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 OCRLQ01968 901 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 SH3PXD2AQ5TCZ1 1133 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 SLC2A7Q6PXP3 512 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 ANKS1BQ7Z6G8 1248 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 FAM131BQ86XD5 332 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 SGF29Q96ES7 293 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 HSFX1Q9UBD0 423 aa12.48□□□□□ -0.41
NCDN-202ENST00000373243 LGALS13Q9UHV8 139 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms