RNA–Protein interactions for RNA: ENST00000372108.9

GTF3C5-204, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-204ENST00000372108 MRPL9Q9BYD2 267 aaKnown RBP16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 TPX2Q9ULW0 747 aaKnown RBP16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 HEY1Q9Y5J3 304 aa16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 PATJQ8NI35 1801 aa16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 COL4A4P53420 1690 aaPredicted RBP16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 RPL22P35268 128 aaKnown RBP16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 SLC5A3P53794 718 aa16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 ROR1Q01973 937 aa16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 GABPB1Q06547 395 aaPredicted RBP16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 DARS2Q6PI48 645 aaKnown RBP16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 TMEM173Q86WV6 379 aaPredicted RBP16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 SLC9A7Q96T83 725 aa16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 TMEM175Q9BSA9 504 aa16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 LRRC4CQ9HCJ2 640 aa16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 ANLNQ9NQW6 1124 aa16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 RRN3Q9NYV6 651 aa16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 ADAM21Q9UKJ8 722 aa16.18■□□□□ 0.18
GTF3C5-204ENST00000372108 SF3B1O75533 1304 aaKnown RBP eCLIP16.17■□□□□ 0.184e-6■■■■■ 124.1
GTF3C5-204ENST00000372108 NUDT17P0C025 328 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 ADRA1BP35368 520 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 NRLP54845 237 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 SLC29A2Q14542 456 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 NFE2Q16621 373 aaPredicted RBP16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 RNASEH2BQ5TBB1 312 aaKnown RBP16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 FUT10Q6P4F1 479 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 SCN4BQ8IWT1 228 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 BCL7CQ8WUZ0 217 aaPredicted RBP16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 FUBP3Q96I24 572 aaKnown RBP eCLIP16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 TSPYL1Q9H0U9 437 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 FAM204AQ9H8W3 233 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 USP29Q9HBJ7 922 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 TMEM39AQ9NV64 488 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 DNAJC17Q9NVM6 304 aaKnown RBP16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 DDIT4Q9NX09 232 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 FBXW11Q9UKB1 542 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 FNDC1Q4ZHG4 1894 aaPredicted RBP16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 MICAL3Q7RTP6 2002 aa16.17■□□□□ 0.18
GTF3C5-204ENST00000372108 H7C0C1 242 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 I6L893 689 aaPredicted RBP16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 RIPK2O43353 540 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 UPP2O95045 317 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 MAP3K6O95382 1288 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 AMHP03971 560 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 SHBGP04278 402 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 AMPD1P23109 780 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 STIP1P31948 543 aaKnown RBP16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 ATP5OP48047 213 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 GBE1Q04446 702 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 SLC10A2Q12908 348 aaPredicted RBP16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 DENND2CQ68D51 928 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 FBXO46Q6PJ61 603 aaPredicted RBP16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 TRMT10CQ7L0Y3 403 aaKnown RBP16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 ZCCHC9Q8N567 271 aaKnown RBP16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 TMBIM4Q9HC24 238 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 ETNK2Q9NVF9 386 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 RCOR3Q9P2K3 495 aaPredicted RBP16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 MFHAS1Q9Y4C4 1052 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 GOLGA6CA6NDK9 693 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 OR6C75A6NL08 312 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 GOLGA6DP0CG33 693 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 ZFXP17010 805 aaPredicted RBP16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 ARL4AP40617 200 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 PGFP49763 221 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 IFRD2Q12894 506 aaPredicted RBP16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 IKBKEQ14164 716 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 MORF4L2Q15014 288 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 TERF2Q15554 542 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 NCBP2-AS2Q69YL0 99 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 BEND5Q7L4P6 421 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 TAS1R1Q7RTX1 841 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 LRRC43Q8N309 656 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 NTAN1Q96AB6 310 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 PGLYRP2Q96PD5 576 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 CDC42EP4Q9H3Q1 356 aaKnown RBP16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 GOLGA6AQ9NYA3 693 aa16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.16■□□□□ 0.18
GTF3C5-204ENST00000372108 F9P00740 461 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 GJA8P48165 433 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 CXCR3P49682 368 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 GPR15P49685 360 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 AIF1P55008 147 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 EIF3BP55884 814 aaKnown RBP16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 YWHAGP61981 247 aaKnown RBP eCLIP16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 SCAPQ12770 1279 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 DDR2Q16832 855 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 EFHC2Q5JST6 749 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 RTP2Q5QGT7 225 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 SDHAF4Q5VUM1 108 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 KCTD16Q68DU8 428 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 ZNF280DQ6N043 979 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 CNKSR3Q6P9H4 555 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 VSTM1Q6UX27 236 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 RSPO2Q6UXX9 243 aaPredicted RBP16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 TAC4Q86UU9 113 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 ATAD1Q8NBU5 361 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 RNF139Q8WU17 664 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 ARMC5Q96C12 935 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 C8orf48Q96LL4 319 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 FOXP3Q9BZS1 431 aa16.15■□□□□ 0.18
GTF3C5-204ENST00000372108 ARHGEF4Q9NR80 690 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms