RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 TRPC3Q13507 836 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 ENPP2Q13822 863 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 LAYNQ6UX15 382 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 TMPRSS6Q8IU80 811 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 NELFCDQ8IXH7 590 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 C12orf29Q8N999 325 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 CADM4Q8NFZ8 388 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 ZNF507Q8TCN5 953 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 RHBDD1Q8TEB9 315 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 JAKMIP2Q96AA8 810 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 CSNK1G1Q9HCP0 422 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 TLR8Q9NR97 1041 aaKnown RBP16.23■□□□□ 0.19
SSR4-204ENST00000370087 FAM49BQ9NUQ9 324 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 THAP10Q9P2Z0 257 aaPredicted RBP16.23■□□□□ 0.19
SSR4-204ENST00000370087 LSM7Q9UK45 103 aaKnown RBP16.23■□□□□ 0.19
SSR4-204ENST00000370087 CLEC4EQ9ULY5 219 aa16.23■□□□□ 0.19
SSR4-204ENST00000370087 A0A087WV48 116 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 A0A1W2PQH9 124 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 EIF3DO15371 548 aaKnown RBP eCLIP16.22■□□□□ 0.19
SSR4-204ENST00000370087 FLRT2O43155 660 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 VNN1O95497 513 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 IGLV3-19P01714 112 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 KLKB1P03952 638 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 ACO1P21399 889 aaKnown RBP16.22■□□□□ 0.19
SSR4-204ENST00000370087 ATICP31939 592 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 CSNK1EP49674 416 aaKnown RBP16.22■□□□□ 0.19
SSR4-204ENST00000370087 STARD3Q14849 445 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 ZNF699Q32M78 642 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 FYB2Q5VWT5 728 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 FAM124AQ86V42 546 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 XXYLT1Q8NBI6 393 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 RBBP8NLQ8NC74 664 aaPredicted RBP16.22■□□□□ 0.19
SSR4-204ENST00000370087 SORCS1Q8WY21 1168 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 SYAP1Q96A49 352 aaPredicted RBP16.22■□□□□ 0.19
SSR4-204ENST00000370087 VRTNQ9H8Y1 702 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 SNX11Q9Y5W9 270 aa16.22■□□□□ 0.19
SSR4-204ENST00000370087 GOLGA4Q13439 2230 aaKnown RBP16.22■□□□□ 0.19
SSR4-204ENST00000370087 KCNK3O14649 394 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 STC2O76061 302 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 PENKP01210 267 aaPredicted RBP16.21■□□□□ 0.19
SSR4-204ENST00000370087 ATP5C1P36542 298 aaKnown RBP16.21■□□□□ 0.19
SSR4-204ENST00000370087 ZNF234Q14588 700 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 KIF19Q2TAC6 998 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 KCNT1Q5JUK3 1230 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 STXBP4Q6ZWJ1 553 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 SIPA1Q96FS4 1042 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 TNIP3Q96KP6 325 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 CDC6Q99741 560 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 FBXO44Q9H4M3 255 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 C6orf106Q9H6K1 298 aaPredicted RBP16.21■□□□□ 0.19
SSR4-204ENST00000370087 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.21■□□□□ 0.191e-7■■■■■ 115.4
SSR4-204ENST00000370087 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.21■□□□□ 0.19
SSR4-204ENST00000370087 SCML2Q9UQR0 700 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 SLC27A6Q9Y2P4 619 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 PCDHGB2Q9Y5G2 931 aa16.21■□□□□ 0.19
SSR4-204ENST00000370087 TENM4Q6N022 2769 aa16.21■□□□□ 0.18
SSR4-204ENST00000370087 EIF4E1BA6NMX2 242 aaKnown RBP16.2■□□□□ 0.18
SSR4-204ENST00000370087 LRRIQ3A6PVS8 624 aaPredicted RBP16.2■□□□□ 0.18
SSR4-204ENST00000370087 PHACTR2O75167 634 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 RARGP13631 454 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 ADORA2BP29275 332 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 NDST1P52848 882 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 CLDN6P56747 220 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 SMAD1Q15797 465 aaKnown RBP16.2■□□□□ 0.18
SSR4-204ENST00000370087 E2F4Q16254 413 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 PTPRNQ16849 979 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 CCDC157Q569K6 752 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 ZNF667Q5HYK9 610 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 FAM26FQ5R3K3 315 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 TMEM215Q68D42 235 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 IL27RAQ6UWB1 636 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 CLEC20AQ6ZU45 233 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 SCD5Q86SK9 330 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 SCUBE3Q8IX30 993 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 PIP4K2CQ8TBX8 421 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 SNX19Q92543 992 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 PRCCQ92733 491 aaPredicted RBP16.2■□□□□ 0.18
SSR4-204ENST00000370087 PIWIL1Q96J94 861 aaKnown RBP16.2■□□□□ 0.18
SSR4-204ENST00000370087 DCBLD2Q96PD2 775 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 TWNKQ96RR1 684 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 USP28Q96RU2 1077 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 TNMDQ9H2S6 317 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 KBTBD4Q9NVX7 518 aa16.2■□□□□ 0.18
SSR4-204ENST00000370087 COL5A1P20908 1838 aaPredicted RBP16.19■□□□□ 0.18
SSR4-204ENST00000370087 FLNBO75369 2602 aaKnown RBP16.19■□□□□ 0.18
SSR4-204ENST00000370087 CLSTN1O94985 981 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 HLA-EP13747 358 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 ITPKBP27987 946 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 CASP1P29466 404 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 OXTRP30559 389 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 ASIC1P78348 528 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 IL9RQ01113 521 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 EHHADHQ08426 723 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 GOLGA8FQ08AF8 430 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 GOLGA8DPQ0D2H9 430 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 BIRC3Q13489 604 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 NCOA4Q13772 614 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 C10orf120Q5SQS8 335 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 SPOPLQ6IQ16 392 aa16.19■□□□□ 0.18
SSR4-204ENST00000370087 DHRS13Q6UX07 377 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms