RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ITGA7Q13683 1181 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 ZNF699Q32M78 642 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 FAM47CQ5HY64 1035 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 JADE1Q6IE81 842 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 FAM43BQ6ZT52 329 aaPredicted RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 H2AFVQ71UI9 128 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 ADAT2Q7Z6V5 191 aaKnown RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 OLIG1Q8TAK6 271 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 PPP1R13LQ8WUF5 828 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 RHOBTB2Q9BYZ6 727 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 APOBEC3GQ9HC16 384 aaKnown RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 MUTYHQ9UIF7 546 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 CD207Q9UJ71 328 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 NOCTQ9UK39 431 aaKnown RBP9.26□□□□□ -0.93
TPM3-213ENST00000368545 TFR2Q9UP52 801 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 CNTN6Q9UQ52 1028 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 PCDHB2Q9Y5E7 798 aa9.26□□□□□ -0.93
TPM3-213ENST00000368545 UQCRHLA0A096LP55 91 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 CYP26A1O43174 497 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 UQCRHP07919 91 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 GZMAP12544 262 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 KRT5P13647 590 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 MYOGP15173 224 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 ARL4DP49703 201 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 MYL6P60660 151 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 GABREP78334 506 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 CDR2Q01850 454 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 SPOPLQ6IQ16 392 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 SLC47A2Q86VL8 602 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 BVESQ8NE79 360 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 CAGE1Q8TC20 777 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 NUDT8Q8WV74 236 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 TTC9Q92623 222 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 WNT8AQ9H1J5 351 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 FAM124BQ9H5Z6 455 aaPredicted RBP9.25□□□□□ -0.93
TPM3-213ENST00000368545 SEPT11Q9NVA2 429 aaKnown RBP9.25□□□□□ -0.93
TPM3-213ENST00000368545 JRKLQ9Y4A0 524 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 CDY2AQ9Y6F7 541 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 DUSP10Q9Y6W6 482 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 DLX3O60479 287 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 ABLIM3O94929 683 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 SLU7O95391 586 aaKnown RBP9.25□□□□□ -0.93
TPM3-213ENST00000368545 CST3P01034 146 aaPredicted RBP9.25□□□□□ -0.93
TPM3-213ENST00000368545 TMEM253P0C7T8 217 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 P4HA1P13674 534 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 SMCPP49901 116 aaPredicted RBP9.25□□□□□ -0.93
TPM3-213ENST00000368545 RBM10P98175 930 aaKnown RBP9.25□□□□□ -0.93
TPM3-213ENST00000368545 SF1Q15637 639 aaKnown RBP9.25□□□□□ -0.93
TPM3-213ENST00000368545 PPP1R2P3Q6NXS1 205 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 CNKSR3Q6P9H4 555 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 CTNNBL1Q8WYA6 563 aaPredicted RBP9.25□□□□□ -0.93
TPM3-213ENST00000368545 USP7Q93009 1102 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 FAM84AQ96KN4 292 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 MDFIQ99750 246 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 ARPC5LQ9BPX5 153 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 XYLT2Q9H1B5 865 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 INSL6Q9Y581 213 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 NUB1Q9Y5A7 615 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 MRFAP1Q9Y605 127 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 CAPN6Q9Y6Q1 641 aa9.25□□□□□ -0.93
TPM3-213ENST00000368545 NCANO14594 1321 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 XPOTO43592 962 aaKnown RBP9.24□□□□□ -0.93
TPM3-213ENST00000368545 RTN2O75298 545 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 CLEC3AO75596 197 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 MOCS3O95396 460 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 ITGB3P05106 788 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 KRT19P08727 400 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 BMP4P12644 408 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 ZSCAN20P17040 1043 aaPredicted RBP9.24□□□□□ -0.93
TPM3-213ENST00000368545 ACO1P21399 889 aaKnown RBP9.24□□□□□ -0.93
TPM3-213ENST00000368545 IGFALSP35858 605 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 CLCN5P51795 746 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 NAP1L1P55209 391 aaKnown RBP9.24□□□□□ -0.93
TPM3-213ENST00000368545 FMO1Q01740 532 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 PTGISQ16647 500 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 ZNF667Q5HYK9 610 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 C11orf96Q7Z7L8 435 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 FAM228AQ86W67 206 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 HACE1Q8IYU2 909 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 BAHD1Q8TBE0 780 aaPredicted RBP9.24□□□□□ -0.93
TPM3-213ENST00000368545 SLC20A1Q8WUM9 679 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 JPH3Q8WXH2 748 aaPredicted RBP9.24□□□□□ -0.93
TPM3-213ENST00000368545 RFFLQ8WZ73 363 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 MRGPRX3Q96LB0 322 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 PACSIN1Q9BY11 444 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 EIF2AQ9BY44 585 aaKnown RBP9.24□□□□□ -0.93
TPM3-213ENST00000368545 ISCUQ9H1K1 167 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 IFT22Q9H7X7 185 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 FBRSQ9HAH7 460 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 SIX4Q9UIU6 781 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 ZNF451Q9Y4E5 1061 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 PCDHB4Q9Y5E5 795 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 TANC1Q9C0D5 1861 aa9.24□□□□□ -0.93
TPM3-213ENST00000368545 ADARB2-AS1A8MUL3 147 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 FSCN2O14926 492 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 MEFVO15553 781 aaPredicted RBP9.23□□□□□ -0.93
TPM3-213ENST00000368545 CTIFO43310 598 aaKnown RBP9.23□□□□□ -0.93
TPM3-213ENST00000368545 RPS6KA5O75582 802 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 GALCP54803 685 aa9.23□□□□□ -0.93
TPM3-213ENST00000368545 MGAT3Q09327 533 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms