RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 KLKB1P03952 638 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 ADH5P11766 374 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 CHKAP35790 457 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 OPRD1P41143 372 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 ZNF165P49910 485 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 NRLP54845 237 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 RAPGEF1Q13905 1077 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 GAB4Q2WGN9 574 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 PREPLQ4J6C6 727 aaPredicted RBP10.31□□□□□ -0.76
CD48-202ENST00000368046 EDEM1Q92611 657 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 PNKPQ96T60 521 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 LSM14BQ9BX40 385 aaKnown RBP10.31□□□□□ -0.76
CD48-202ENST00000368046 FAM126AQ9BYI3 521 aaPredicted RBP10.31□□□□□ -0.76
CD48-202ENST00000368046 HSD3B7Q9H2F3 369 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 SEMA4AQ9H3S1 761 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 FAM86C1Q9NVL1 165 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 WDR35Q9P2L0 1181 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 AJAP1Q9UKB5 411 aaPredicted RBP10.31□□□□□ -0.76
CD48-202ENST00000368046 DAAM1Q9Y4D1 1078 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 DENND4CQ5VZ89 1909 aa10.31□□□□□ -0.76
CD48-202ENST00000368046 KMT2EQ8IZD2 1858 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 SART1O43290 800 aaKnown RBP10.3□□□□□ -0.76
CD48-202ENST00000368046 PAPSS2O95340 614 aaPredicted RBP10.3□□□□□ -0.76
CD48-202ENST00000368046 LTFP02788 710 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 HMBSP08397 361 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 SLC6A11P48066 632 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 HARS2P49590 506 aaKnown RBP10.3□□□□□ -0.76
CD48-202ENST00000368046 SNX16P57768 344 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 YWHAZP63104 245 aaKnown RBP10.3□□□□□ -0.76
CD48-202ENST00000368046 UBXN1Q04323 297 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 TRIP4Q15650 581 aaPredicted RBP10.3□□□□□ -0.76
CD48-202ENST00000368046 ANO4Q32M45 955 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 PPP1R15BQ5SWA1 713 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 NAIF1Q69YI7 327 aaPredicted RBP10.3□□□□□ -0.76
CD48-202ENST00000368046 Q6ZS52 159 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 NUDT18Q6ZVK8 323 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 BEND5Q7L4P6 421 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 SLC47A2Q86VL8 602 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 FMNL3Q8IVF7 1028 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 AOPEPQ8N6M6 819 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 NAT16Q8N8M0 369 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 NELL1Q92832 810 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 NOX5Q96PH1 765 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 PHOX2BQ99453 314 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 FUCA2Q9BTY2 467 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 DEC1Q9P2X7 70 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 CYTH4Q9UIA0 394 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 AGO1Q9UL18 857 aaKnown RBP10.3□□□□□ -0.76
CD48-202ENST00000368046 HBS1LQ9Y450 684 aaKnown RBP10.3□□□□□ -0.76
CD48-202ENST00000368046 FHOD1Q9Y613 1164 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 COL4A2P08572 1712 aa10.3□□□□□ -0.76
CD48-202ENST00000368046 ANAPC1Q9H1A4 1944 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 E5RJQ4 531 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 K7EQS6 105 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 HOXC11O43248 304 aaPredicted RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 PAPSS1O43252 624 aaPredicted RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 RNF40O75150 1001 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 KAT7O95251 611 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 FYNP06241 537 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 PNMA6AP0CW24 399 aaPredicted RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 NCAM1P13591 858 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 CYP11B1P15538 503 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 CORO1AP31146 461 aaKnown RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 GRIA2P42262 883 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 TNFRSF4P43489 277 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 POLR2FP61218 127 aaKnown RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 SATB1Q01826 763 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 PDCLQ13371 301 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 SYCP1Q15431 976 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 EFHC1Q5JVL4 640 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 MSANTD2Q6P1R3 559 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 ZC3H14Q6PJT7 736 aaKnown RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 TSSK4Q6SA08 328 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 TPGS1Q6ZTW0 290 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 APTXQ7Z2E3 356 aaKnown RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 ALYREFQ86V81 257 aaKnown RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 DENND1CQ8IV53 801 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 UNC45BQ8IWX7 931 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 DHX40Q8IX18 779 aaKnown RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 ZNF454Q8N9F8 522 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 ZBTB44Q8NCP5 570 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 CLEC4CQ8WTT0 213 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 ATRIPQ8WXE1 791 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 EZH1Q92800 747 aaPredicted RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 PLD4Q96BZ4 506 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 PPP1R13BQ96KQ4 1090 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 PCMTD1Q96MG8 357 aaPredicted RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 XPO6Q96QU8 1125 aaKnown RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 ERGIC2Q96RQ1 377 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 TRIM62Q9BVG3 475 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 BBS2Q9BXC9 721 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 GANQ9H2C0 597 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 PDCL3Q9H2J4 239 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 PRMT8Q9NR22 394 aaPredicted RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 FAM207AQ9NSI2 230 aaPredicted RBP10.29□□□□□ -0.76
CD48-202ENST00000368046 ZSCAN32Q9NX65 697 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 MARK1Q9P0L2 795 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 SFMBT1Q9UHJ3 866 aa10.29□□□□□ -0.76
CD48-202ENST00000368046 FBXO10Q9UK96 956 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms