RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CYB561D2O14569 222 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 TRIM66O15016 1216 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 STK10O94804 968 aaKnown RBP14.54□□□□□ -0.08
USF1-202ENST00000368020 ZWINTO95229 277 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 GSTA1P08263 222 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 LCP1P13796 627 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 PTPN1P18031 435 aaKnown RBP14.54□□□□□ -0.08
USF1-202ENST00000368020 LMO2P25791 158 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 GCAP28676 217 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 NOS2P35228 1153 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 MSH2P43246 934 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 SOX4Q06945 474 aaPredicted RBP14.54□□□□□ -0.08
USF1-202ENST00000368020 BBS9Q3SYG4 887 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 PPP6R3Q5H9R7 873 aaPredicted RBP14.54□□□□□ -0.08
USF1-202ENST00000368020 FNBP1LQ5T0N5 605 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 ANKRD22Q5VYY1 191 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 RGS9BPQ6ZS82 235 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 CYP4X1Q8N118 509 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 VPS52Q8N1B4 723 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 B3GNT5Q9BYG0 378 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 TSPYL2Q9H2G4 693 aaPredicted RBP14.54□□□□□ -0.08
USF1-202ENST00000368020 RNF39Q9H2S5 420 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 DHX35Q9H5Z1 703 aaKnown RBP14.54□□□□□ -0.08
USF1-202ENST00000368020 LRRC4Q9HBW1 653 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 PNPLA8Q9NP80 782 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 FAM105AQ9NUU6 356 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 RRN3Q9NYV6 651 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 USP15Q9Y4E8 981 aaPredicted RBP14.54□□□□□ -0.08
USF1-202ENST00000368020 HEY1Q9Y5J3 304 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 CDY2AQ9Y6F7 541 aa14.54□□□□□ -0.08
USF1-202ENST00000368020 IQANK1A0A1B0GTG1 560 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 H0YHG0 523 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 PTGESO14684 152 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 SNX3O60493 162 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 GCATO75600 419 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 GABBR2O75899 941 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 TMEM63AO94886 807 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 THP07101 528 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 FAM200BP0CF97 657 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 ZNF135P52742 658 aaPredicted RBP14.53□□□□□ -0.08
USF1-202ENST00000368020 GPX6P59796 221 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 YWHAZP63104 245 aaKnown RBP14.53□□□□□ -0.08
USF1-202ENST00000368020 MRPS5P82675 430 aaKnown RBP14.53□□□□□ -0.08
USF1-202ENST00000368020 SARNPP82979 210 aaKnown RBP14.53□□□□□ -0.08
USF1-202ENST00000368020 CDK16Q00536 496 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 ACTN3Q08043 901 aaPredicted RBP14.53□□□□□ -0.08
USF1-202ENST00000368020 SLC20A2Q08357 652 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 NPNTQ6UXI9 565 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 PIGZQ86VD9 579 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 SIX6OS1Q8N1H7 587 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 MICALL1Q8N3F8 863 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 MGARPQ8TDB4 240 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 QKIQ96PU8 341 aaKnown RBP eCLIP14.53□□□□□ -0.08
USF1-202ENST00000368020 TGS1Q96RS0 853 aaKnown RBP14.53□□□□□ -0.08
USF1-202ENST00000368020 SLC9A7Q96T83 725 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 RAB6BQ9NRW1 208 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 NOD1Q9Y239 953 aa14.53□□□□□ -0.08
USF1-202ENST00000368020 ARHGEF37A1IGU5 675 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 CCT8L1PA6NM43 557 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 TCP11X1B4DZS4 312 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 H3BRJ5 948 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 TRDMT1O14717 391 aaKnown RBP14.52□□□□□ -0.08
USF1-202ENST00000368020 TM9SF1O15321 606 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 TPSB2P20231 275 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 PCSK1P29120 753 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 LIG3P49916 1009 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 TPSAB1Q15661 275 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 TTC31Q49AM3 519 aaPredicted RBP14.52□□□□□ -0.08
USF1-202ENST00000368020 NUGGCQ68CJ6 796 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 ANKRD33Q7Z3H0 272 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 ANKMY2Q8IV38 441 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 FUKQ8N0W3 1084 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 FBF1Q8TES7 1133 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 CCT6BQ92526 530 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 NT5C3BQ969T7 300 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 FAM149B1Q96BN6 582 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 TOX2Q96NM4 488 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 CSPG4P5Q96PW8 444 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 PAFAH2Q99487 392 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 SENP6Q9GZR1 1112 aaPredicted RBP14.52□□□□□ -0.08
USF1-202ENST00000368020 XAB2Q9HCS7 855 aaKnown RBP14.52□□□□□ -0.08
USF1-202ENST00000368020 TRMT13Q9NUP7 481 aaKnown RBP14.52□□□□□ -0.08
USF1-202ENST00000368020 RAD54BQ9Y620 910 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 TEX264Q9Y6I9 313 aa14.52□□□□□ -0.08
USF1-202ENST00000368020 DNAH12Q6ZR08 3092 aa14.52□□□□□ -0.09
USF1-202ENST00000368020 OAS1P00973 400 aaKnown RBP14.52□□□□□ -0.09
USF1-202ENST00000368020 SKIP12755 728 aa14.52□□□□□ -0.09
USF1-202ENST00000368020 RBL1P28749 1068 aa14.52□□□□□ -0.09
USF1-202ENST00000368020 FDFT1P37268 417 aa14.52□□□□□ -0.09
USF1-202ENST00000368020 SULT1E1P49888 294 aa14.52□□□□□ -0.09
USF1-202ENST00000368020 ADIGQ0VDE8 80 aa14.52□□□□□ -0.09
USF1-202ENST00000368020 LRRC14Q15048 493 aa14.52□□□□□ -0.09
USF1-202ENST00000368020 LGSNQ5TDP6 509 aa14.52□□□□□ -0.09
USF1-202ENST00000368020 HEATR6Q6AI08 1181 aaKnown RBP14.52□□□□□ -0.09
USF1-202ENST00000368020 SLC39A5Q6ZMH5 540 aa14.52□□□□□ -0.09
USF1-202ENST00000368020 PDZD4Q76G19 769 aaPredicted RBP14.52□□□□□ -0.09
USF1-202ENST00000368020 FAM126BQ8IXS8 530 aa14.52□□□□□ -0.09
USF1-202ENST00000368020 ELAC2Q9BQ52 826 aaKnown RBP14.52□□□□□ -0.09
USF1-202ENST00000368020 MED10Q9BTT4 135 aa14.52□□□□□ -0.09
USF1-202ENST00000368020 TRIM62Q9BVG3 475 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms