RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 RPL9P32969 192 aaKnown RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 CDCA2Q69YH5 1023 aaPredicted RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 EFCAB12Q6NXP0 572 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 EXOC3L1Q86VI1 746 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 LEMD2Q8NC56 503 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 ATG4CQ96DT6 458 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 BTBD6Q96KE9 485 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.52□□□□□ -1.21
VTA1-202ENST00000367630 B2RBV5 119 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 H0YGN5 161 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 ADRB2P07550 413 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 CPA3P15088 417 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 PECAM1P16284 738 aaPredicted RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 GNL1P36915 607 aaPredicted RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 RGS2P41220 211 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 MAP3K10Q02779 954 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 LRRC8BQ6P9F7 803 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 KIAA0408Q6ZU52 694 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 KAT2BQ92831 832 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 AKT1S1Q96B36 256 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 HDAC11Q96DB2 347 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 C9orf72Q96LT7 481 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 CEP44Q9C0F1 390 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 MAGEE1Q9HCI5 957 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 NFS1Q9Y697 457 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 SNCAIPQ9Y6H5 919 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 STRCP1A6NGW2 1772 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 HARS2P49590 506 aaKnown RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 RPS6KA3P51812 740 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 CELF3Q5SZQ8 465 aaKnown RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 MFSD14CQ5VZR4 134 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 SCARA5Q6ZMJ2 495 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 PRPF39Q86UA1 669 aaKnown RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 TRIML2Q8N7C3 387 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 STKLD1Q8NE28 680 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 ZSWIM2Q8NEG5 633 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 ZNF384Q8TF68 577 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 SLC10A4Q96EP9 437 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 IFT43Q96FT9 208 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 QKIQ96PU8 341 aaKnown RBP eCLIP7.52□□□□□ -1.21
VTA1-202ENST00000367630 RTKNQ9BST9 563 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 OSBPL10Q9BXB5 764 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 MRPS26Q9BYN8 205 aaKnown RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 PLEKHA4Q9H4M7 779 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 HEY2Q9UBP5 337 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 ANGPTL3Q9Y5C1 460 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 BAZ2AQ9UIF9 1905 aaKnown RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 LGR5O75473 907 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 STAG3L1P0CL83 205 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 MYBL2P10244 700 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 NOS2P35228 1153 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 OCA2Q04671 838 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 CHI3L2Q15782 390 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 BRMS1LQ5PSV4 323 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 LYPLAL1Q5VWZ2 237 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 SEL1L3Q68CR1 1132 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 MARK2Q7KZI7 788 aaKnown RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 ADGRG6Q86SQ4 1221 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 ZNF513Q8N8E2 541 aaPredicted RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 GOLM1Q8NBJ4 401 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 ACTL9Q8TC94 416 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 RNF157Q96PX1 679 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 TARS2Q9BW92 718 aaKnown RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 AP4E1Q9UPM8 1137 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 GPR182O15218 404 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 PSMG1O95456 288 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 NUP107P57740 925 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 NCALDP61601 193 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 PHEXP78562 749 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 MTX3Q5HYI7 312 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 RNASEH2BQ5TBB1 312 aaKnown RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 PLA2G4FQ68DD2 849 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 MRNIPQ6NTE8 343 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 GPC2Q8N158 579 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 CERS5Q8N5B7 392 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 REPS2Q8NFH8 660 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 HTR3CQ8WXA8 447 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 ZNF184Q99676 751 aaPredicted RBP7.52□□□□□ -1.21
VTA1-202ENST00000367630 MTMR12Q9C0I1 747 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 ETNK2Q9NVF9 386 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 ARHGEF38Q9NXL2 777 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 SLC8A2Q9UPR5 921 aa7.52□□□□□ -1.21
VTA1-202ENST00000367630 H0YJX3 145 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 H3BMM5 538 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 FKBP9O95302 570 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 RALBP11234 206 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 CASP5P51878 434 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 CNGA3Q16281 694 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 ALDH16A1Q8IZ83 802 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 OR6J1Q8NGC5 347 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 OSCP1Q8WVF1 389 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 TRIM54Q9BYV2 358 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 GPBP1L1Q9HC44 474 aaPredicted RBP7.51□□□□□ -1.21
VTA1-202ENST00000367630 CIDEBQ9UHD4 219 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 RNF225M0QZC1 329 aaPredicted RBP7.51□□□□□ -1.21
VTA1-202ENST00000367630 FAM189A1O60320 539 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 SNX2O60749 519 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 BRD2P25440 801 aaKnown RBP7.51□□□□□ -1.21
VTA1-202ENST00000367630 CLCN5P51795 746 aa7.51□□□□□ -1.21
VTA1-202ENST00000367630 OCRLQ01968 901 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms