RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 RMND1Q9NWS8 449 aa11.74□□□□□ -0.53
H3F3A-203ENST00000366815 RAB23Q9ULC3 237 aa11.74□□□□□ -0.53
H3F3A-203ENST00000366815 SLC8A2Q9UPR5 921 aa11.74□□□□□ -0.53
H3F3A-203ENST00000366815 ANTXRLA6NF34 631 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 K7EQS6 105 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 LRP3O75074 770 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 IL2RAP01589 272 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 FAM200BP0CF97 657 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 ADORA2BP29275 332 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 SPEM2Q0P670 501 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 DNAH14Q0VDD8 3507 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 MESP2Q0VG99 397 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 FBXL13Q8NEE6 735 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 RNF217Q8TC41 542 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 USP33Q8TEY7 942 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 GAB3Q8WWW8 586 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 WBP2Q969T9 261 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 FAXDC2Q96IV6 333 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 TIGD1Q96MW7 591 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 HHIPQ96QV1 700 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 FBXO44Q9H4M3 255 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 PNPLA8Q9NP80 782 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 TBC1D14Q9P2M4 693 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 PCDHA5Q9Y5H7 936 aa11.73□□□□□ -0.53
H3F3A-203ENST00000366815 CETN3O15182 167 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 TLR5O60602 858 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 EPB41P11171 864 aaKnown RBP11.72□□□□□ -0.53
H3F3A-203ENST00000366815 CD58P19256 250 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 EIF2DP41214 584 aaKnown RBP11.72□□□□□ -0.53
H3F3A-203ENST00000366815 MXI1P50539 228 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 RNF144AP50876 292 aaPredicted RBP11.72□□□□□ -0.53
H3F3A-203ENST00000366815 PMS1P54277 932 aaKnown RBP11.72□□□□□ -0.53
H3F3A-203ENST00000366815 LMNB2Q03252 620 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 DMC1Q14565 340 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 PUM1Q14671 1186 aaKnown RBP eCLIP11.72□□□□□ -0.531e-8■□□□□ 8.7
H3F3A-203ENST00000366815 RSPO4Q2I0M5 234 aaPredicted RBP11.72□□□□□ -0.53
H3F3A-203ENST00000366815 RNFT1Q5M7Z0 435 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 ANKRD40Q6AI12 368 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 C12orf40Q86WS4 652 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 SFTPA1Q8IWL2 248 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 SVOPQ8N4V2 548 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 TPCN2Q8NHX9 752 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 ERCC4Q92889 916 aaPredicted RBP11.72□□□□□ -0.53
H3F3A-203ENST00000366815 ACDQ96AP0 544 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 OTUB2Q96DC9 234 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 TLR8Q9NR97 1041 aaKnown RBP11.72□□□□□ -0.53
H3F3A-203ENST00000366815 OSER1Q9NX31 292 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 RAB20Q9NX57 234 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 USP18Q9UMW8 372 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 SCML2Q9UQR0 700 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 COQ4Q9Y3A0 265 aa11.72□□□□□ -0.53
H3F3A-203ENST00000366815 A0A0A0MRY4 1105 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 TRIM49BA6NDI0 452 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 GOLGA6L4A6NEF3 574 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 SLC16A3O15427 465 aaKnown RBP11.71□□□□□ -0.53
H3F3A-203ENST00000366815 CYP26A1O43174 497 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 GREM1O60565 184 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 RPP40O75818 363 aaKnown RBP11.71□□□□□ -0.53
H3F3A-203ENST00000366815 SMC2O95347 1197 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 ADH5P11766 374 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 TRIM21P19474 475 aaKnown RBP11.71□□□□□ -0.53
H3F3A-203ENST00000366815 SLC6A11P48066 632 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 KIF11P52732 1056 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 CBWD6Q4V339 395 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 CBWD3Q5JTY5 395 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 CBWD5Q5RIA9 395 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 LY6G5CQ5SRR4 150 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 CEP68Q76N32 757 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.71□□□□□ -0.53
H3F3A-203ENST00000366815 BBS7Q8IWZ6 715 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 SLC4A11Q8NBS3 891 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 CCDC150Q8NCX0 1101 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 CCDC26Q8TAB7 109 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 SMARCE1Q969G3 411 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 ARID3AQ99856 593 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 FAM124BQ9H5Z6 455 aaPredicted RBP11.71□□□□□ -0.53
H3F3A-203ENST00000366815 NMUR1Q9HB89 426 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 CISHQ9NSE2 258 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 SEMA4GQ9NTN9 838 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 EBF1Q9UH73 591 aa11.71□□□□□ -0.53
H3F3A-203ENST00000366815 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.71□□□□□ -0.53
H3F3A-203ENST00000366815 SDK1Q7Z5N4 2213 aa11.71□□□□□ -0.54
H3F3A-203ENST00000366815 PRR5-ARHGAP8B1AHC4 643 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 TMEM229AB2RXF0 380 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 HOXC11O43248 304 aaPredicted RBP11.7□□□□□ -0.54
H3F3A-203ENST00000366815 STX10O60499 249 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 APBB3O95704 486 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 TBX18O95935 607 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 ACO1P21399 889 aaKnown RBP11.7□□□□□ -0.54
H3F3A-203ENST00000366815 RAD23BP54727 409 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 SEC13P55735 322 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 MRPS21P82921 87 aaKnown RBP11.7□□□□□ -0.54
H3F3A-203ENST00000366815 ARHGAP8P85298 464 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 FKBP3Q00688 224 aaKnown RBP11.7□□□□□ -0.54
H3F3A-203ENST00000366815 LRRC63Q05C16 580 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 CSRP2Q16527 193 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 ZNF394Q53GI3 561 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 C2orf27AQ580R0 203 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 KLHDC10Q6PID8 442 aa11.7□□□□□ -0.54
H3F3A-203ENST00000366815 HTR3DQ70Z44 454 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms