RNA–Protein interactions for RNA: ENST00000363347.1

RNU6-839P-201, Transcript of RNA, U6 small nuclear 839, pseudogene, humanhuman

BASIC

Gene RNU6-839P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-839P-201ENST00000363347 GRHL2Q6ISB3 625 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 CCDC144NLQ6NUI1 221 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 SYNE3Q6ZMZ3 975 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 HEATR4Q86WZ0 1026 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 LRRC71Q8N4P6 559 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 TMEM57Q8N5G2 664 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 PPHLN1Q8NEY8 458 aaKnown RBP4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 PROKR1Q8TCW9 393 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 CACTINQ8WUQ7 758 aaKnown RBP4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 SDCCAG3Q96C92 435 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 RSPRY1Q96DX4 576 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 REXO5Q96IC2 774 aaKnown RBP4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 VPS50Q96JG6 964 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 MAELQ96JY0 434 aaKnown RBP4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 PRR25Q96S07 402 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 SEC62Q99442 399 aaKnown RBP4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 AIFM2Q9BRQ8 373 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 KLC4Q9NSK0 619 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 FBXO28Q9NVF7 368 aa4.87□□□□□ -1.63
RNU6-839P-201ENST00000363347 A8MVJ9 347 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 HMGB1P1B2RPK0 211 aaPredicted RBP4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 M0QYT0 321 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 AP4M1O00189 453 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 CA12O43570 354 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 PMPCBO75439 489 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 RHOBTB3O94955 611 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 LARGE1O95461 756 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 ONECUT2O95948 504 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 EGR2P11161 476 aaPredicted RBP4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 ALADP13716 330 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 CREB1P16220 341 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 ZFXP17010 805 aaPredicted RBP4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 XBP1P17861 261 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 TNFAIP3P21580 790 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 MCM5P33992 734 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 DDIT3P35638 169 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 RBM5P52756 815 aaKnown RBP eCLIP4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 DGKQP52824 942 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 SUMO2P61956 95 aaKnown RBP4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 DGCR2P98153 550 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 E2F1Q01094 437 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 UBE3AQ05086 875 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 DDX10Q13206 875 aaKnown RBP4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 SEMA3BQ13214 749 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 TRPC3Q13507 836 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 FHL2Q14192 279 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 DLGAP5Q15398 846 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 SMAD1Q15797 465 aaKnown RBP4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 ZNF569Q5MCW4 686 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 ANKRD40Q6AI12 368 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 DGAT2L7PQ6IED9 249 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 RHOUQ7L0Q8 258 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 MAATS1Q7Z4T9 603 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 TFAP2BQ92481 460 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 HAS1Q92839 578 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 LENG9Q96B70 501 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 PBKQ96KB5 322 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 TWNKQ96RR1 684 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 MLST8Q9BVC4 326 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 WDR11Q9BZH6 1224 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 WASH6PQ9NQA3 447 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 SLC2A4RGQ9NR83 387 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 RASSF1Q9NS23 344 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 LIN7CQ9NUP9 197 aaKnown RBP4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 SH2B3Q9UQQ2 575 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 RRP7AQ9Y3A4 280 aaKnown RBP4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 REXO2Q9Y3B8 237 aaKnown RBP4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 PCDHB2Q9Y5E7 798 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 FER1L4A9Z1Z3 1794 aa4.86□□□□□ -1.63
RNU6-839P-201ENST00000363347 PIPSLA2A3N6 862 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 WDR27A2RRH5 827 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 CES2O00748 559 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 HOXC11O43248 304 aaPredicted RBP4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 PEX11BO96011 259 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 TFRCP02786 760 aaKnown RBP4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 NR2F6P10588 404 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 ADRA1DP25100 572 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 PCSK6P29122 969 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 CTGFP29279 349 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 LIFRP42702 1097 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 FAM3BP58499 235 aaPredicted RBP4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 TLE2Q04725 743 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 DEUP1Q05D60 604 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 KCNJ12Q14500 433 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 PTPRRQ15256 657 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 ABHD17BQ5VST6 288 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 RETSATQ6NUM9 610 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 RINLQ6ZS11 566 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 RSRC2Q7L4I2 434 aaKnown RBP4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 ANKS1BQ7Z6G8 1248 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 SLC44A3Q8N4M1 653 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 OVCA2Q8WZ82 227 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 HTRA1Q92743 480 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 RFKQ969G6 155 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 SKA1Q96BD8 255 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 PAAF1Q9BRP4 392 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 SLC26A6Q9BXS9 759 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 ZHX3Q9H4I2 956 aa4.85□□□□□ -1.63
RNU6-839P-201ENST00000363347 SERHL2Q9H4I8 314 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms