RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 UBL4BQ8N7F7 174 aa21.52■■□□□ 1.03
SHISA4-201ENST00000362011 CENPIQ92674 756 aaPredicted RBP21.52■■□□□ 1.03
SHISA4-201ENST00000362011 NT5C3BQ969T7 300 aa21.52■■□□□ 1.03
SHISA4-201ENST00000362011 RRAGDQ9NQL2 400 aaPredicted RBP21.52■■□□□ 1.03
SHISA4-201ENST00000362011 OLA1Q9NTK5 396 aaKnown RBP21.52■■□□□ 1.03
SHISA4-201ENST00000362011 CD207Q9UJ71 328 aa21.52■■□□□ 1.03
SHISA4-201ENST00000362011 CCDC66A2RUB6 948 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 SPDYE4A6NLX3 237 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 M0QYT0 321 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 CCL16O15467 120 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 PSTPIP1O43586 416 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 HNRNPA1P09651 372 aaKnown RBP eCLIP21.51■■□□□ 1.03
SHISA4-201ENST00000362011 RARGP13631 454 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 TFE3P19532 575 aaPredicted RBP21.51■■□□□ 1.03
SHISA4-201ENST00000362011 CTNNA1P35221 906 aaKnown RBP21.51■■□□□ 1.03
SHISA4-201ENST00000362011 PCK1P35558 622 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 PPP3CCP48454 512 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 PGFP49763 221 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 TAS2R40P59535 323 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 SH3PXD2AQ5TCZ1 1133 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 PAPD7Q5XG87 772 aaKnown RBP21.51■■□□□ 1.03
SHISA4-201ENST00000362011 MSANTD2Q6P1R3 559 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 RNF135Q8IUD6 432 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 RHOT1Q8IXI2 618 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 ZNF334Q9HCZ1 680 aaPredicted RBP21.51■■□□□ 1.03
SHISA4-201ENST00000362011 OSER1Q9NX31 292 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 ZDHHC7Q9NXF8 308 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 TRPM5Q9NZQ8 1165 aa21.51■■□□□ 1.03
SHISA4-201ENST00000362011 NUP210Q8TEM1 1887 aaPredicted RBP21.5■■□□□ 1.03
SHISA4-201ENST00000362011 WDFY4Q6ZS81 3184 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 DDX3YO15523 660 aaKnown RBP21.5■■□□□ 1.03
SHISA4-201ENST00000362011 ENDOD1O94919 500 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 MIPP30301 263 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 GBP1P32455 592 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 RDXP35241 583 aaKnown RBP21.5■■□□□ 1.03
SHISA4-201ENST00000362011 DNA2P51530 1060 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 PITX1P78337 314 aaPredicted RBP21.5■■□□□ 1.03
SHISA4-201ENST00000362011 DEUP1Q05D60 604 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 CLUL1Q15846 466 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 OTUD1Q5VV17 481 aaPredicted RBP21.5■■□□□ 1.03
SHISA4-201ENST00000362011 SNX30Q5VWJ9 437 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 RSRC2Q7L4I2 434 aaKnown RBP21.5■■□□□ 1.03
SHISA4-201ENST00000362011 BNIPLQ7Z465 357 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 BMP8AQ7Z5Y6 402 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 ARFGAP1Q8N6T3 406 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 DQX1Q8TE96 717 aaKnown RBP21.5■■□□□ 1.03
SHISA4-201ENST00000362011 PGAP3Q96FM1 320 aaPredicted RBP21.5■■□□□ 1.03
SHISA4-201ENST00000362011 SMOC2Q9H3U7 446 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 FAM204AQ9H8W3 233 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.5■■□□□ 1.03
SHISA4-201ENST00000362011 CLEC1BQ9P126 229 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 MUTYHQ9UIF7 546 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 SNX12Q9UMY4 172 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.5■■□□□ 1.03
SHISA4-201ENST00000362011 PCDHA3Q9Y5H8 950 aa21.5■■□□□ 1.03
SHISA4-201ENST00000362011 RFPL2O75678 378 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 TRUB2O95900 331 aaKnown RBP21.49■■□□□ 1.03
SHISA4-201ENST00000362011 F9P00740 461 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 GJC1P36383 396 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 HDAC4P56524 1084 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 PABPC1LQ4VXU2 614 aaKnown RBP21.49■■□□□ 1.03
SHISA4-201ENST00000362011 LRRC38Q5VT99 294 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 SCYL2Q6P3W7 929 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 TAC4Q86UU9 113 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 ZNF276Q8N554 614 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 EFHBQ8N7U6 833 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 KRT35Q92764 455 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 EDAQ92838 391 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 CDK5RAP1Q96SZ6 601 aaKnown RBP21.49■■□□□ 1.03
SHISA4-201ENST00000362011 ADAM33Q9BZ11 813 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 USP18Q9UMW8 372 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 TRIOO75962 3097 aa21.49■■□□□ 1.03
SHISA4-201ENST00000362011 PRPSAP2O60256 369 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 XYLBO75191 536 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 TADA3O75528 432 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 URI1O94763 535 aaPredicted RBP21.48■■□□□ 1.03
SHISA4-201ENST00000362011 F11P03951 625 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 KRT7P08729 469 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 POU2F2P09086 479 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 TCF4P15884 667 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 PRLRP16471 622 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 TCP1P17987 556 aaKnown RBP21.48■■□□□ 1.03
SHISA4-201ENST00000362011 SLC25A11Q02978 314 aaKnown RBP21.48■■□□□ 1.03
SHISA4-201ENST00000362011 NME3Q13232 169 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 RAB6CQ53S08 254 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 SND1Q7KZF4 910 aaKnown RBP eCLIP21.48■■□□□ 1.03
SHISA4-201ENST00000362011 POLNQ7Z5Q5 900 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 TADA2BQ86TJ2 420 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 TMC8Q8IU68 726 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 HS6ST3Q8IZP7 471 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 SMRP1Q8NCR6 262 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 CASP10Q92851 521 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 GCNAQ96QF7 691 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 OSBPL9Q96SU4 736 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 LRRC3Q9BY71 257 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 RAB6CQ9H0N0 254 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 IGFLR1Q9H665 355 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 IL21Q9HBE4 155 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 ASAH2Q9NR71 780 aa21.48■■□□□ 1.03
SHISA4-201ENST00000362011 TMEM51Q9NW97 253 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms