RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 MT-CO3P00414 261 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 WNT1P04628 370 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 TXKP42681 527 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 SPATA2LQ8IUW3 424 aaPredicted RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 C12orf56Q8IXR9 622 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 SKA1Q96BD8 255 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 SLC46A1Q96NT5 459 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 DCLK3Q9C098 648 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 SLKQ9H2G2 1235 aaPredicted RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 CUEDC1Q9NWM3 386 aaPredicted RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 NXF1Q9UBU9 619 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 CLCA2Q9UQC9 943 aa6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 CNOT1A5YKK6 2376 aaKnown RBP6.34□□□□□ -1.39
CDC42SE2-201ENST00000360515 LRRK1Q38SD2 2015 aa6.34□□□□□ -1.4
CDC42SE2-201ENST00000360515 A0A1B0GVT2 93 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 MEI4A8MW99 385 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 NR5A1Q13285 461 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 EIF3IQ13347 325 aaKnown RBP6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 HECTD3Q5T447 861 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 TDRD10Q5VZ19 366 aaKnown RBP6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 BTBD8Q5XKL5 378 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 DCP2Q8IU60 420 aaKnown RBP6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 HPS3Q969F9 1004 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 MYLPFQ96A32 169 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 MKRN2Q9H000 416 aaKnown RBP6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 ABI2Q9NYB9 513 aaPredicted RBP6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 NTN3O00634 580 aaPredicted RBP6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 TOR1BO14657 336 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 TPP1O14773 563 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 SLC16A4O15374 487 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 BCAT1P54687 386 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 CXADRP78310 365 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 RBP5P82980 135 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 DDR2Q16832 855 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 B4GALNT3Q6L9W6 998 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 NEK5Q6P3R8 708 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 PAQR9Q6ZVX9 377 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 CCDC186Q7Z3E2 898 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 TMEM25Q86YD3 366 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 CRYBG2Q8N1P7 616 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 PRCCQ92733 491 aaPredicted RBP6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 MIB2Q96AX9 1013 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 MYO19Q96H55 970 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 PYM1Q9BRP8 204 aaKnown RBP6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 BMP2KQ9NSY1 1161 aaPredicted RBP6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 NLGN3Q9NZ94 848 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 USP20Q9Y2K6 914 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 ATP8B3O60423 1300 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 ALOX15BO15296 676 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 NOBOXO60393 691 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 SEC24BO95487 1268 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 DGKGP49619 791 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 L1TD1Q5T7N2 865 aaKnown RBP6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 ARMCX6Q7L4S7 300 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 BBS7Q8IWZ6 715 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 SETD7Q8WTS6 366 aaKnown RBP6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 KCNE4Q8WWG9 221 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 SYT15Q9BQS2 421 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 DDX19AQ9NUU7 478 aaKnown RBP6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 CYP46A1Q9Y6A2 500 aa6.33□□□□□ -1.4
CDC42SE2-201ENST00000360515 UBE4BO95155 1302 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 LOC400499M0QZD8 3231 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 A0A1W2PNU3 283 aaPredicted RBP6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 TMX2-CTNND1H3BSU7 103 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 ZBTB24O43167 697 aaPredicted RBP6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 TRIP4Q15650 581 aaPredicted RBP6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 DHRS13Q6UX07 377 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 KCNK18Q7Z418 384 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 OR2T34Q8NGX1 318 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 SPATA20Q8TB22 786 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 SCFD1Q8WVM8 642 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 BIRC7Q96CA5 298 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 TCEANC2Q96MN5 208 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 SLITRK1Q96PX8 696 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 FBXO44Q9H4M3 255 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 THSD1Q9NS62 852 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 TMEM30AQ9NV96 361 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 EVA1BQ9NVM1 165 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 ARHGAP20Q9P2F6 1191 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 EFSO43281 561 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 OPA1O60313 960 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 HUS1O60921 280 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 IGLV3-27P01718 113 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 TYRP14679 529 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 STARD3Q14849 445 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 NAPEPLDQ6IQ20 393 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 ANKS1BQ7Z6G8 1248 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 DTX1Q86Y01 620 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 WDR49Q8IV35 697 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 CCDC83Q8IWF9 413 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 DIS3L2Q8IYB7 885 aaKnown RBP6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 SDR16C5Q8N3Y7 309 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 UCMAQ8WVF2 138 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 ACOX2Q99424 681 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 CD93Q9NPY3 652 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 SALL4Q9UJQ4 1053 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 ANAPC2Q9UJX6 822 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 KIAA1024Q9UPX6 916 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 SLC28A2O43868 658 aa6.32□□□□□ -1.4
CDC42SE2-201ENST00000360515 KRT38O76015 456 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms