RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 ZFP1Q6P2D0 407 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 KRT73Q86Y46 540 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 ZNF786Q8N393 782 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 SLC16A10Q8TF71 515 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 MYL12AP19105 171 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 POLR2LP62875 67 aaKnown RBP9.94□□□□□ -0.82
CUX1-203ENST00000360264 EPHA10Q5JZY3 1008 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 KLHDC7AQ5VTJ3 777 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 BHLHB9Q6PI77 547 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 SCUBE1Q8IWY4 988 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 FAM153AQ9UHL3 310 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 NCKAP1Q9Y2A7 1128 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 CCR1P32246 355 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 VPS72Q15906 364 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 TMEM154Q6P9G4 183 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 KCTD10Q9H3F6 313 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 RHOCP08134 193 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 PCNAP12004 261 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 NPY2RP49146 381 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 ALFQ53S48 1182 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 CCNI2Q6ZMN8 369 aaPredicted RBP9.94□□□□□ -0.82
CUX1-203ENST00000360264 FBXO2Q9UK22 296 aaPredicted RBP9.94□□□□□ -0.82
CUX1-203ENST00000360264 GTF2A1LQ9UNN4 478 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 CORO2BQ9UQ03 480 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 ZNF711Q9Y462 761 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 MAPTP10636 758 aaKnown RBP9.94□□□□□ -0.82
CUX1-203ENST00000360264 BBS4Q96RK4 519 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 ASB7Q9H672 318 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 AXIN2Q9Y2T1 843 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 MYH7BA7E2Y1 1941 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 METTL3Q86U44 580 aaKnown RBP9.94□□□□□ -0.82
CUX1-203ENST00000360264 MAGEA13PA6NCF6 341 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 OGTO15294 1046 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 WARSP23381 471 aaKnown RBP9.94□□□□□ -0.82
CUX1-203ENST00000360264 OAZ1P54368 228 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 TCEA2Q15560 299 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 TRIT1Q9H3H1 467 aaKnown RBP9.94□□□□□ -0.82
CUX1-203ENST00000360264 TULP4Q9NRJ4 1543 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 A0A0G2JLW4 131 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 SKIV2L2P42285 1042 aaKnown RBP9.94□□□□□ -0.82
CUX1-203ENST00000360264 TRIQKQ629K1 86 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 CHORDC1Q9UHD1 332 aaPredicted RBP9.94□□□□□ -0.82
CUX1-203ENST00000360264 EFEMP1Q12805 493 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 SMAD1Q15797 465 aaKnown RBP9.94□□□□□ -0.82
CUX1-203ENST00000360264 CAMKK1Q8N5S9 505 aa9.94□□□□□ -0.82
CUX1-203ENST00000360264 PLA2R1Q13018 1463 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 TGFB3P10600 412 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 ATG16L2Q8NAA4 619 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 CPVLQ9H3G5 476 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 ADPRHL2Q9NX46 363 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 DNPEPQ9ULA0 475 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 PIK3CDO00329 1044 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 ULK2Q8IYT8 1036 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 LZTR1Q8N653 840 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 USP38Q8NB14 1042 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 GLMNQ92990 594 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 STON1Q9Y6Q2 735 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 STX4Q12846 297 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 LRRC36Q1X8D7 754 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 PLEKHH3Q7Z736 793 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 B3GALNT2Q8NCR0 500 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 DBR1Q9UK59 544 aaKnown RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 NPHP3-ACAD11A0A0J9YXS1 232 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 PDE9AO76083 593 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 MED26O95402 600 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 TLX1P31314 330 aaPredicted RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 ACTN3Q08043 901 aaPredicted RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 ZBTB49Q6ZSB9 765 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 COMMD2Q86X83 199 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 TMEM132CQ8N3T6 1108 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 CPNE1Q99829 537 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 RIBC2Q9H4K1 309 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 SERPINB11Q96P15 392 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 TARS2Q9BW92 718 aaKnown RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 PABPC3Q9H361 631 aaKnown RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 NR5A2O00482 541 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 DSG3P32926 999 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 RNASE11Q8TAA1 199 aaKnown RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 MCOLN3Q8TDD5 553 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 TRIM66O15016 1216 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 EPN2O95208 641 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 VAC14Q08AM6 782 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 PCBP1Q15365 356 aaKnown RBP eCLIP9.93□□□□□ -0.826e-6■■■■■ 34.5
CUX1-203ENST00000360264 METTL7BQ6UX53 244 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 CLEC17AQ6ZS10 378 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 DENND6AQ8IWF6 608 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 TDRD5Q8NAT2 981 aaKnown RBP9.93□□□□□ -0.82
CUX1-203ENST00000360264 HPS5Q9UPZ3 1129 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 SREBF1P36956 1147 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 HSD17B3P37058 310 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 NR6A1Q15406 480 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 CYP2A13Q16696 494 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 RPTNQ6XPR3 784 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 MED8Q96G25 268 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 VCPIP1Q96JH7 1222 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 GPR75-ASB3A0A0A6YYF3 556 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 THP07101 528 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 MYBP10242 640 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 RRM1P23921 792 aa9.93□□□□□ -0.82
CUX1-203ENST00000360264 PWP1Q13610 501 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms