RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MED26O95402 600 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 GLP2RO95838 553 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 KRT6BP04259 564 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 FGFR1P11362 822 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 KRT6CP48668 564 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 ARHGAP15Q53QZ3 475 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 ARHGAP22Q7Z5H3 698 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 ARMCX1Q9P291 453 aa16.46■□□□□ 0.23
COL18A1-203ENST00000359759 UGGT1Q9NYU2 1555 aa16.46■□□□□ 0.22
COL18A1-203ENST00000359759 EFCAB10A6NFE3 127 aa16.46■□□□□ 0.22
COL18A1-203ENST00000359759 FKBP6O75344 327 aa16.46■□□□□ 0.22
COL18A1-203ENST00000359759 IFNA14P01570 189 aa16.46■□□□□ 0.22
COL18A1-203ENST00000359759 FCGR1AP12314 374 aa16.46■□□□□ 0.22
COL18A1-203ENST00000359759 CD44P16070 742 aaKnown RBP16.46■□□□□ 0.22
COL18A1-203ENST00000359759 TCF7P36402 384 aaPredicted RBP16.46■□□□□ 0.22
COL18A1-203ENST00000359759 CDC42EP1Q00587 391 aa16.46■□□□□ 0.22
COL18A1-203ENST00000359759 TSNQ15631 228 aaKnown RBP16.46■□□□□ 0.22
COL18A1-203ENST00000359759 KYQ8NBH2 561 aa16.46■□□□□ 0.22
COL18A1-203ENST00000359759 SYN2Q92777 582 aaPredicted RBP16.46■□□□□ 0.22
COL18A1-203ENST00000359759 USP18Q9UMW8 372 aa16.46■□□□□ 0.22
COL18A1-203ENST00000359759 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.45■□□□□ 0.22
COL18A1-203ENST00000359759 PSMD11O00231 422 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 O00370 1275 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 SLC37A4O43826 429 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 HK2P52789 917 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 N4BP2L1Q5TBK1 243 aaPredicted RBP16.45■□□□□ 0.22
COL18A1-203ENST00000359759 DNAJC14Q6Y2X3 702 aaPredicted RBP16.45■□□□□ 0.22
COL18A1-203ENST00000359759 NYAP1Q6ZVC0 841 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 COLGALT1Q8NBJ5 622 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 SERAC1Q96JX3 654 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 TNFRSF21O75509 655 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 MAPK9P45984 424 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 DHFR2Q86XF0 187 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 EXD1Q8NHP7 514 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 HNRNPLLQ8WVV9 542 aaKnown RBP16.45■□□□□ 0.22
COL18A1-203ENST00000359759 MTA3Q9BTC8 594 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 DPY30Q9C005 99 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 LAMC1P11047 1609 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 TSPAN19P0C672 248 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 ADARP55265 1226 aaKnown RBP16.45■□□□□ 0.22
COL18A1-203ENST00000359759 ITGADQ13349 1161 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 POU6F1Q14863 301 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 SPOCD1Q6ZMY3 1216 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 ADI1Q9BV57 179 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 TRIM39Q9HCM9 518 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 TDRKHQ9Y2W6 561 aaKnown RBP16.45■□□□□ 0.22
COL18A1-203ENST00000359759 WDR27A2RRH5 827 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 OXCT1P55809 520 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 FASTKQ14296 549 aaKnown RBP16.45■□□□□ 0.22
COL18A1-203ENST00000359759 PKN1Q16512 942 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 LRRC74BQ6ZQY2 392 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 BTN2A1Q7KYR7 527 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 POMGNT2Q8NAT1 580 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 FNDC5Q8NAU1 212 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 BTBD10Q9BSF8 475 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 DAGLAQ9Y4D2 1042 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 CDC42BPGQ6DT37 1551 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 MAPKAPK2P49137 400 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 RAD23AP54725 363 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 MICALL2Q8IY33 904 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 NFKBIZQ9BYH8 718 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 KCNH7Q9NS40 1196 aa16.45■□□□□ 0.22
COL18A1-203ENST00000359759 TNNI3P19429 210 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 GRK4P32298 578 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 BOLA3Q53S33 107 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 TEX13BQ9BXU2 312 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 PRRG3Q9BZD7 231 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 GRIP2Q9C0E4 1043 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 PCDHGA4Q9Y5G9 962 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 MYL12BO14950 172 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 CLOCKO15516 846 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 FAM86B2P0C5J1 330 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 NRF1Q16656 503 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 DGUOKQ16854 277 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 TIGD7Q6NT04 549 aaPredicted RBP16.44■□□□□ 0.22
COL18A1-203ENST00000359759 ATG9AQ7Z3C6 839 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 CDK20Q8IZL9 346 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 SVOPQ8N4V2 548 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 RORBQ92753 470 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 FBXO32Q969P5 355 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 TAAR1Q96RJ0 339 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 ROBO2Q9HCK4 1378 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 MAGEB2O15479 319 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 CSDE1O75534 798 aaKnown RBP16.44■□□□□ 0.22
COL18A1-203ENST00000359759 GRK3P35626 688 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 EFEMP1Q12805 493 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 PCNX4Q63HM2 1172 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 CES3Q6UWW8 571 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 SLC20A1Q8WUM9 679 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 TRIM63Q969Q1 353 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 VANGL2Q9ULK5 521 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 NAALADL1Q9UQQ1 740 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 FOSL2P15408 326 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 SLC34A1Q06495 639 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 MTSS1LQ765P7 747 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 STK32CQ86UX6 486 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 EMC1Q8N766 993 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 MYLK2Q9H1R3 596 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 ACTR8Q9H981 624 aa16.44■□□□□ 0.22
COL18A1-203ENST00000359759 JMJD4Q9H9V9 463 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms