RNA–Protein interactions for RNA: ENST00000359446.9

LDLRAD4-201, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD4, Length 8,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-201ENST00000359446 PLEKP08567 350 aaPredicted RBP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 CBWD3Q5JTY5 395 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 CBWD5Q5RIA9 395 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 BNC2Q6ZN30 1099 aaPredicted RBP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 PLEKHH3Q7Z736 793 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 SLC47A2Q86VL8 602 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 RNASE11Q8TAA1 199 aaKnown RBP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 UTP15Q8TED0 518 aaKnown RBP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 SERHL2Q9H4I8 314 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 SERHLQ9NQF3 203 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 AHSPQ9NZD4 102 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 NCKIPSDQ9NZQ3 722 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 CNPP09543 421 aaKnown RBP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 DGKKQ5KSL6 1271 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 TAF2Q6P1X5 1199 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 TMC7Q7Z402 723 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 SLC22A9Q8IVM8 553 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 POP1Q99575 1024 aaKnown RBP13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 KLHL28Q9NXS3 571 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 HAO1Q9UJM8 370 aa13.08□□□□□ -0.32
LDLRAD4-201ENST00000359446 FOXN3O00409 490 aaPredicted RBP13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 ITGAXP20702 1163 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 NUP107P57740 925 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 MAGEB18Q96M61 343 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 COMMD8Q9NX08 183 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 KLRC2P26717 231 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 ACOX1Q15067 660 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 ZSWIM1Q9BR11 485 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 ATP6V1HQ9UI12 483 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 CCZ1BP86790 482 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 CCZ1P86791 482 aaPredicted RBP13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 OTUD4Q01804 1114 aaKnown RBP13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 FAM131BQ86XD5 332 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 TC2NQ8N9U0 490 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 DDHD1Q8NEL9 900 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 MOSPD2Q8NHP6 518 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 MAP3K14Q99558 947 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 MRPL39Q9NYK5 338 aaKnown RBP13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 NDOR1Q9UHB4 597 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 TPBGLP0DKB5 382 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 CYP2A7P20853 494 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 SEC24CP53992 1094 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 MRPS35P82673 323 aaKnown RBP13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 CSHL1Q14406 222 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 CRYMQ14894 314 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 USP49Q70CQ1 688 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 ZNF512BQ96KM6 892 aaPredicted RBP13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 PRKAG3Q9UGI9 489 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 DPP7Q9UHL4 492 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 MYH11P35749 1972 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 ADGRA3Q8IWK6 1321 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 A0A087X0T9 212 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 FAM25AB3EWG3 89 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 FAM25CB3EWG5 89 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 FAM25GB3EWG6 89 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 TEX28O15482 410 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 KLHL41O60662 606 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 FBXO21O94952 628 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 RBP1P09455 135 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 CNTFP26441 200 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 VAC14Q08AM6 782 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 SPACA7Q96KW9 195 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 MYH8P13535 1937 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 TRIM24O15164 1050 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 CCNT2O60583 730 aaKnown RBP13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 ZNF280DQ6N043 979 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 TFAP2DQ7Z6R9 452 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 GATAD2AQ86YP4 633 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 PHF21BQ96EK2 531 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 MROH8Q9H579 483 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 FBXL21Q9UKT6 434 aa13.07□□□□□ -0.32
LDLRAD4-201ENST00000359446 PQBP1O60828 265 aaKnown RBP13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 OR1E1P30953 314 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 ZCWPW2Q504Y3 356 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 NECAB2Q7Z6G3 386 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 KCNF1Q9H3M0 494 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 GTF3C4Q9UKN8 822 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 SPATA2Q9UM82 520 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 CYP11B2P19099 503 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 TRIM32Q13049 653 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 COL23A1Q86Y22 540 aaPredicted RBP13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 FAM45AQ8TCE6 357 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 UBE2Q2LH0YL09 131 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 JCHAINP01591 159 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 SUPT20HL2P0C7V6 817 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 PABPC1P11940 636 aaKnown RBP13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 ITGA9Q13797 1035 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 INAQ16352 499 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 RABL6Q3YEC7 729 aaPredicted RBP13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 RAD9BQ6WBX8 426 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 REXO4Q9GZR2 422 aaKnown RBP13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 SIK3Q9Y2K2 1263 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 MPP3Q13368 585 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 PLD1Q13393 1074 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 HLA-DQA1Q5Y7H0 255 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 TERB1Q8NA31 727 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 TBC1D13Q9NVG8 400 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 NLRP9Q7RTR0 991 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 TMEM159Q96B96 161 aa13.06□□□□□ -0.32
LDLRAD4-201ENST00000359446 FBXO44Q9H4M3 255 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms