RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 M0QYT0 321 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 ENDOD1O94919 500 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 ARHGEF15O94989 841 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 VNN2O95498 520 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 CA3P07451 260 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 CTSAP10619 480 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 ALADP13716 330 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 RPL17P18621 184 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 TFE3P19532 575 aaPredicted RBP14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 CDKN2BP42772 138 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 TUFMP49411 452 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 GPR15P49685 360 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 CDH6P55285 790 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 YWHAGP61981 247 aaKnown RBP eCLIP14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 KLF1Q13351 362 aaPredicted RBP14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 KRT81Q14533 505 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 SIX1Q15475 284 aaPredicted RBP14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 DDR2Q16832 855 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 RAB6CQ53S08 254 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 KCNT1Q5JUK3 1230 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 ERMARDQ5T6L9 678 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 OTUD1Q5VV17 481 aaPredicted RBP14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 SYPL2Q5VXT5 272 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 BSPRYQ5W0U4 402 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 BTBD8Q5XKL5 378 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 TPGS2Q68CL5 300 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 MAP7D3Q8IWC1 876 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 PRELID2Q8N945 189 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 KCTD6Q8NC69 237 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 PRSS33Q8NF86 280 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 SCAMP5Q8TAC9 235 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 ANKRD7Q92527 254 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 MAGOHBQ96A72 148 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 SPATA17Q96L03 361 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 TGS1Q96RS0 853 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 CLSTN3Q9BQT9 956 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 PARD6BQ9BYG5 372 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 RAB6CQ9H0N0 254 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 ZBP1Q9H171 429 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 EPC1Q9H2F5 836 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 FAM204AQ9H8W3 233 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 HOMER3Q9NSC5 361 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 ABCC13Q9NSE7 274 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 FNIP2Q9P278 1114 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 HSFX1Q9UBD0 423 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 NAALADL1Q9UQQ1 740 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 OBSL1O75147 1896 aa14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 MTCL1Q9Y4B5 1905 aaKnown RBP14.41□□□□□ -0.1
PDLIM5-203ENST00000359265 C3orf70A6NLC5 250 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 ADAM12O43184 909 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 RAD51CO43502 376 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 LPXNO60711 386 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 F9P00740 461 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 FYNP06241 537 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 YWHAQP27348 245 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 FNTAP49354 379 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 AIF1P55008 147 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 DUSP4Q13115 394 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 DHX34Q14147 1143 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 LLGL1Q15334 1064 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 TAZQ16635 292 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 SDHAF4Q5VUM1 108 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 KAZNQ674X7 775 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 DENND5BQ6ZUT9 1274 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 SND1Q7KZF4 910 aaKnown RBP eCLIP14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 BNIPLQ7Z465 357 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 MAATS1Q7Z4T9 603 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 VSIG1Q86XK7 387 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 PSTKQ8IV42 348 aaKnown RBP14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 SLC7A14Q8TBB6 771 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 PGAP3Q96FM1 320 aaPredicted RBP14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 HERPUD2Q9BSE4 406 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 HEMGNQ9BXL5 484 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 CALN1Q9BXU9 219 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 TMEM51Q9NW97 253 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 GPATCH2LQ9NWQ4 482 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 IL37Q9NZH6 218 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 STIM2Q9P246 746 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 RAB21Q9UL25 225 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 AP4E1Q9UPM8 1137 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 SLC27A5Q9Y2P5 690 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 NR2E1Q9Y466 385 aa14.4□□□□□ -0.1
PDLIM5-203ENST00000359265 ANAPC1Q9H1A4 1944 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 SYNJ2BP-COX16A0A087WUM0 186 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 FAM187AA6NFU0 413 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 ZNF487B1APH4 448 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 ABLIM3O94929 683 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 HEXIM1O94992 359 aaKnown RBP14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 KRT10P13645 584 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 GBP1P32455 592 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 CA8P35219 290 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 PSEN1P49768 467 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 ARSEP51690 589 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 ERVK-21P61565 698 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 PITX1P78337 314 aaPredicted RBP14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 NME3Q13232 169 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 RAB33AQ14088 237 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 TFDP2Q14188 446 aa14.39□□□□□ -0.11
PDLIM5-203ENST00000359265 BRD3Q15059 726 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms