RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ART4Q93070 314 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 SH3GL2Q99962 352 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 TXLNGYQ9BZA5 131 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 MMADHCQ9H3L0 296 aaPredicted RBP13.15□□□□□ -0.3
GGPS1-202ENST00000358966 DHX35Q9H5Z1 703 aaKnown RBP13.15□□□□□ -0.3
GGPS1-202ENST00000358966 RGS18Q9NS28 235 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 TBC1D13Q9NVG8 400 aa13.15□□□□□ -0.3
GGPS1-202ENST00000358966 KLRC2P26717 231 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 PCK1P35558 622 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 PGFP49763 221 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 ATP1A2P50993 1020 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 GPS1Q13098 491 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 SLC29A2Q14542 456 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 DBN1Q16643 649 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 GLB1LQ6UWU2 654 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 TMCO2Q7Z6W1 182 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-202ENST00000358966 DEFB128Q7Z7B8 93 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 SIX6OS1Q8N1H7 587 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 FAM71DQ8N9W8 422 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 SPATA18Q8TC71 538 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 FAM124BQ9H5Z6 455 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-202ENST00000358966 FOXO6A8MYZ6 492 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 ODC1P11926 461 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 SULT1E1P49888 294 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 PMS2P54278 862 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 VCPP55072 806 aaKnown RBP13.14□□□□□ -0.31
GGPS1-202ENST00000358966 ROR2Q01974 943 aaKnown RBP13.14□□□□□ -0.31
GGPS1-202ENST00000358966 IZUMO3Q5VZ72 239 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 CAPN12Q6ZSI9 719 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 MYCBPAPQ8TBZ2 947 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 DIS3LQ8TF46 1054 aaKnown RBP13.14□□□□□ -0.31
GGPS1-202ENST00000358966 STK32AQ8WU08 396 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 LRRC45Q96CN5 670 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 PGBD4Q96DM1 585 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 SNF8Q96H20 258 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 PGLYRP2Q96PD5 576 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 TRAIPQ9BWF2 469 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 PCDH18Q9HCL0 1135 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 ANLNQ9NQW6 1124 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 HAUS2Q9NVX0 235 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 CORO1CQ9ULV4 474 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-202ENST00000358966 SZT2Q5T011 3432 aa13.14□□□□□ -0.31
GGPS1-202ENST00000358966 F5H423 210 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-202ENST00000358966 FYNP06241 537 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 LHX1P48742 406 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 MRPS5P82675 430 aaKnown RBP13.13□□□□□ -0.31
GGPS1-202ENST00000358966 OVOS1Q6IE37 1185 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 TMEM173Q86WV6 379 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-202ENST00000358966 ALLCQ8N6M5 410 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 PCDH19Q8TAB3 1148 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 SLC35B2Q8TB61 432 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 MAIP1Q8WWC4 291 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 SLCO2A1Q92959 643 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 STAMBPL1Q96FJ0 436 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 TSEN34Q9BSV6 310 aaKnown RBP13.13□□□□□ -0.31
GGPS1-202ENST00000358966 ADAM7Q9H2U9 754 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 ETNK2Q9NVF9 386 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 NUDT5Q9UKK9 219 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 PHF24Q9UPV7 400 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 XIRP2A4UGR9 3374 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 I6L893 689 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-202ENST00000358966 PIAS1O75925 651 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 LINGO3P0C6S8 592 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 SELPP16109 830 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 CYP2F1P24903 491 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 HPDP32754 393 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-202ENST00000358966 RPL9P32969 192 aaKnown RBP13.13□□□□□ -0.31
GGPS1-202ENST00000358966 DRG2P55039 364 aaKnown RBP13.13□□□□□ -0.31
GGPS1-202ENST00000358966 IFT88Q13099 833 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 FASTKD3Q14CZ7 662 aaKnown RBP13.13□□□□□ -0.31
GGPS1-202ENST00000358966 NOMO2Q5JPE7 1267 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 ALS2CLQ60I27 953 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 BBS12Q6ZW61 710 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 TTC9BQ8N6N2 239 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 PQLC3Q8N755 202 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 GPR152Q8TDT2 470 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 HSFY1Q96LI6 401 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 C9orf72Q96LT7 481 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 C11orf84Q9BUA3 381 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-202ENST00000358966 PIGVQ9NUD9 493 aa13.13□□□□□ -0.31
GGPS1-202ENST00000358966 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.13□□□□□ -0.31
GGPS1-202ENST00000358966 TLDC2A0PJX2 215 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 VWA8A3KMH1 1905 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 M0QYT0 321 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 SOAT2O75908 522 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 UPP2O95045 317 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 RBP3P10745 1247 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 CYP2C18P33260 490 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 EIF3EP60228 445 aaKnown RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 COPS2P61201 443 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 RHBDF2Q6PJF5 856 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 PLD5Q8N7P1 536 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 ARL10Q8N8L6 244 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 GRK7Q8WTQ7 553 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 KCTD15Q96SI1 283 aaPredicted RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 TRIM4Q9C037 500 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 CDC42EP4Q9H3Q1 356 aaKnown RBP13.12□□□□□ -0.31
GGPS1-202ENST00000358966 MTMR10Q9NXD2 777 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 ANAPC5Q9UJX4 755 aa13.12□□□□□ -0.31
GGPS1-202ENST00000358966 AP4E1Q9UPM8 1137 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms