RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 TMEM110Q86TL2 294 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 NT5DC4Q86YG4 428 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 ARID3BQ8IVW6 561 aaPredicted RBP8.89□□□□□ -0.99
RFX3-202ENST00000358730 MCUQ8NE86 351 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 MICAL1Q8TDZ2 1067 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 SH3TC2Q8TF17 1288 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 CLEC4CQ8WTT0 213 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 E2F7Q96AV8 911 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 MTBPQ96DY7 904 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 C7orf26Q96N11 449 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 CXCL16Q9H2A7 254 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 DONSONQ9NYP3 566 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 TUBGCP4Q9UGJ1 667 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 AP4E1Q9UPM8 1137 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 GINS2Q9Y248 185 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 RALGAPA2Q2PPJ7 1873 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 ASB14A6NK59 587 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 EIF4E1BA6NMX2 242 aaKnown RBP8.89□□□□□ -0.99
RFX3-202ENST00000358730 CXCL11O14625 94 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 KIF1CO43896 1103 aaKnown RBP8.89□□□□□ -0.99
RFX3-202ENST00000358730 NPTXRO95502 500 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 GSTA2P09210 222 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 KITP10721 976 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 CPA2P48052 419 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 CBLBQ13191 982 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 LAMC2Q13753 1193 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 TTLL12Q14166 644 aaPredicted RBP8.89□□□□□ -0.99
RFX3-202ENST00000358730 KPNB1Q14974 876 aaKnown RBP8.89□□□□□ -0.99
RFX3-202ENST00000358730 RCN1Q15293 331 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 CCDC6Q16204 474 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 DPYSL2Q16555 572 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 HEATR6Q6AI08 1181 aaKnown RBP8.89□□□□□ -0.99
RFX3-202ENST00000358730 MTHFD1LQ6UB35 978 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 KCNT2Q6UVM3 1135 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 NUDCD3Q8IVD9 361 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 NDUFAF2Q8N183 169 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 C7orf31Q8N865 590 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.89□□□□□ -0.99
RFX3-202ENST00000358730 OR6B3Q8NGW1 331 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 SLC35F5Q8WV83 523 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 AFG1LQ8WV93 481 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 APBB2Q92870 758 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 EBNA1BP2Q99848 306 aaKnown RBP8.89□□□□□ -0.99
RFX3-202ENST00000358730 LPIN3Q9BQK8 851 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 MROH8Q9H579 483 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 MKS1Q9NXB0 559 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 KCNK4Q9NYG8 393 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 SIRPGQ9P1W8 387 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 NME7Q9Y5B8 376 aa8.89□□□□□ -0.99
RFX3-202ENST00000358730 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 FAM159BA6NKW6 160 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 HCRTO43612 131 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 GCATO75600 419 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 GABBR2O75899 941 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 TOP3BO95985 862 aaKnown RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 TPSB2P20231 275 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 L1CAMP32004 1257 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 GRM5P41594 1212 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 GRIA1P42261 906 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 SNX16P57768 344 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 SLC10A2Q12908 348 aaPredicted RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 TPSAB1Q15661 275 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 TSNAXIP1Q2TAA8 658 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 TEX44Q53QW1 395 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 MDH1BQ5I0G3 518 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 GLRA4Q5JXX5 417 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 CES4AQ5XG92 561 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 C4orf22Q6V702 233 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 DENND5BQ6ZUT9 1274 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 SIGLEC10Q96LC7 697 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 ZMAT2Q96NC0 199 aaKnown RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 QKIQ96PU8 341 aaKnown RBP eCLIP8.88□□□□□ -0.99
RFX3-202ENST00000358730 LBHD1Q9BQE6 289 aaPredicted RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 DPEP3Q9H4B8 488 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 ZNF395Q9H8N7 513 aaPredicted RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 XAB2Q9HCS7 855 aaKnown RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 TAS2R1Q9NYW7 299 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 PPARGC1AQ9UBK2 798 aaKnown RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 NR2E3Q9Y5X4 410 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 SPDYE5A6NIY4 337 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 A8MXQ7 604 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 ZNF487B1APH4 448 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 H3BRJ5 948 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 ENO1P06733 434 aaKnown RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 LCP1P13796 627 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 CCDC130P13994 396 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 ZFXP17010 805 aaPredicted RBP8.88□□□□□ -0.99
RFX3-202ENST00000358730 PAX7P23759 505 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 ADORA2BP29275 332 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 ABL2P42684 1182 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 OCRLQ01968 901 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 RCN2Q14257 317 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 MUM1Q2TAK8 710 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 ACSBG2Q5FVE4 666 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 CASC4Q6P4E1 433 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 ZDHHC17Q8IUH5 632 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 CRLF3Q8IUI8 442 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 ANKRD13AQ8IZ07 590 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 TEX9Q8N6V9 391 aa8.88□□□□□ -0.99
RFX3-202ENST00000358730 CCDC185Q8N715 623 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms