RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 PCK1P35558 622 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 PEX19P40855 299 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 MORF4L2Q15014 288 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 CLLU1OSQ5K130 101 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 FAM117BQ6P1L5 589 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.17□□□□□ -0.32e-19■■■■■ 46.5
RTFDC1-202ENST00000357348 MFN1Q8IWA4 741 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 ZFAND2BQ8WV99 257 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 PTCD3Q96EY7 689 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 HEMGNQ9BXL5 484 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 HCSTQ9UBK5 93 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 DRG1Q9Y295 367 aaKnown RBP13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 NUMBLQ9Y6R0 609 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 ALPK3Q96L96 1907 aa13.17□□□□□ -0.3
RTFDC1-202ENST00000357348 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 KLHL33A6NCF5 533 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 ENO4A6NNW6 628 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 I3L4J1 428 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 NDC80O14777 642 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 XPOTO43592 962 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 HCRTO43612 131 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 DNAJC6O75061 913 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 ENTPD5O75356 428 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 CFHP08603 1231 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 VHLP40337 213 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 TUBP50607 506 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 SARNPP82979 210 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 TRIM68Q6AZZ1 485 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 ZNF449Q6P9G9 518 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 ALLCQ8N6M5 410 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 C3orf58Q8NDZ4 430 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 CPA5Q8WXQ8 436 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 VCPIP1Q96JH7 1222 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 DHRS4Q9BTZ2 278 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 CADM1Q9BY67 442 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 PSMC3IPQ9P2W1 217 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 LRFN2Q9ULH4 789 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 PCDHB7Q9Y5E2 793 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 LAMA3Q16787 3333 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 PIRO00625 290 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 B4GALT3O60512 393 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 SKIP12755 728 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 PECAM1P16284 738 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 CA4P22748 312 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 SP100P23497 879 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 ATICP31939 592 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 KHDC1Q4VXA5 237 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 CWF19L1Q69YN2 538 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 PLEKHA7Q6IQ23 1121 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 SLC30A9Q6PML9 568 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 GLB1LQ6UWU2 654 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 PHLDB2Q86SQ0 1253 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 ZNF280BQ86YH2 543 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 PASD1Q8IV76 773 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 MZB1Q8WU39 189 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 VWCEQ96DN2 955 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 TWNKQ96RR1 684 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 MRPL45Q9BRJ2 306 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 MAK16Q9BXY0 300 aaKnown RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 NMRK1Q9NWW6 199 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 LRCH1Q9Y2L9 728 aa13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 TIMM13Q9Y5L4 95 aaPredicted RBP13.16□□□□□ -0.3
RTFDC1-202ENST00000357348 KPNA7A9QM74 516 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 NVLO15381 856 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 CCDC22O60826 627 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 SNUPNO95149 360 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 SYN1P17600 705 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 KRT15P19012 456 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 GNA15P30679 374 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 PTPN7P35236 360 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 BPIFB4P59827 614 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 ROR2Q01974 943 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 FASTKD3Q14CZ7 662 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 C2CD6Q53TS8 623 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 RNASEH2BQ5TBB1 312 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 HHATQ5VTY9 493 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 FAM91A1Q658Y4 838 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 OR52E8Q6IFG1 317 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 LVRNQ6Q4G3 990 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 ABI1Q8IZP0 508 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 C4orf33Q8N1A6 199 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 GLIS1Q8NBF1 620 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 BTBD10Q9BSF8 475 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 MMADHCQ9H3L0 296 aaPredicted RBP13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 SHOC2Q9UQ13 582 aa13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.15□□□□□ -0.3
RTFDC1-202ENST00000357348 A0A1W2PPM1 405 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 POC1B-GALNT4F8VUJ3 575 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 DDHD2O94830 711 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 EOMESO95936 686 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 TIMP1P01033 207 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 IL1BP01584 269 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 CXCL10P02778 98 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 BRD2P25440 801 aaKnown RBP13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 NSFP46459 744 aaKnown RBP13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 TAF6P49848 677 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 PAPOLAP51003 745 aaKnown RBP13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 LILRA4P59901 499 aa13.15□□□□□ -0.31
RTFDC1-202ENST00000357348 MAMLD1Q13495 774 aa13.15□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms