RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PATL1Q86TB9 770 aaKnown RBP8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 RSPH3Q86UC2 560 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 RASSF3Q86WH2 238 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 TMPRSS6Q8IU80 811 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 CRLF3Q8IUI8 442 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 ULK2Q8IYT8 1036 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 NUP93Q8N1F7 819 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 LARGE2Q8N3Y3 721 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 TMEM174Q8WUU8 243 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 ATG4CQ96DT6 458 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 PANX3Q96QZ0 392 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 MMP19Q99542 508 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 C17orf75Q9HAS0 396 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 PPM1HQ9ULR3 514 aa8.53□□□□□ -1.04
CDC42SE1-201ENST00000357235 GREB1LQ9C091 1923 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 STRNO43815 780 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 SERPINB7O75635 380 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 CCND2P30279 289 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 GRIA2P42262 883 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 TBL3Q12788 808 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 PEX6Q13608 980 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZNF699Q32M78 642 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 RAB6CQ53S08 254 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 WDTC1Q8N5D0 677 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 TTLL6Q8N841 843 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 TTC13Q8NBP0 860 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 MZB1Q8WU39 189 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 RAB6CQ9H0N0 254 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 GPATCH2LQ9NWQ4 482 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 SLC7A8Q9UHI5 535 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 PACSIN3Q9UKS6 424 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 POLIQ9UNA4 740 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZNFX1Q9P2E3 1918 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 CBFA2T3O75081 653 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 NPM3O75607 178 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 LYPLA1O75608 230 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 SORBS2O94875 1100 aaKnown RBP8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 EDN1P05305 212 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 PDGFRBP09619 1106 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 MIPP30301 263 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 HOXD11P31277 338 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 ETV4P43268 484 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 CCR3P51677 355 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 ARPC4P59998 168 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 PPP6R3Q5H9R7 873 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 FAM102AQ5T9C2 384 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 LRRC38Q5VT99 294 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 C16orf46Q6P387 395 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 SLC26A11Q86WA9 606 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 ARFGAP1Q8N6T3 406 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 AGR3Q8TD06 166 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 SLC44A1Q8WWI5 657 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 CGRRF1Q99675 332 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 WWP1Q9H0M0 922 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 RPAP3Q9H6T3 665 aaPredicted RBP8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 HESX1Q9UBX0 185 aa8.52□□□□□ -1.05
CDC42SE1-201ENST00000357235 MATN2O00339 956 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SPTLC1O15269 473 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 PGM3O95394 542 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SNRPAP09012 282 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 C6orf222P0C671 652 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 NCF2P19878 526 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 POLR2BP30876 1174 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 PPIDQ08752 370 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 ASPHQ12797 758 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 KRT81Q14533 505 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 CCDC153Q494R4 210 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SPDYAQ5MJ70 313 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 TTC39BQ5VTQ0 682 aaPredicted RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 LPCAT4Q643R3 524 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 ATG16L1Q676U5 607 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SLFN12LQ6IEE8 588 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SNRNP48Q6IEG0 339 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 BBS12Q6ZW61 710 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 RAPH1Q70E73 1250 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 EEPD1Q7L9B9 569 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 POLNQ7Z5Q5 900 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 CPXM1Q96SM3 734 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 C20orf27Q9GZN8 174 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 DRC3Q9H069 523 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 USP29Q9HBJ7 922 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SLC38A10Q9HBR0 1119 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SSU72Q9NP77 194 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 STRIP2Q9ULQ0 834 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 USP18Q9UMW8 372 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SPO11Q9Y5K1 396 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SIPA1L1O43166 1804 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 A8MXQ7 604 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 E9PBE3 544 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 FBP2O00757 339 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 NDC80O14777 642 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 VILLO15195 856 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 ZMPSTE24O75844 475 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 KCNA4P22459 653 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 CRABP2P29373 138 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 ACADVLP49748 655 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 SLC25A11Q02978 314 aaKnown RBP8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 RELAQ04206 551 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 CDC16Q13042 620 aa8.51□□□□□ -1.05
CDC42SE1-201ENST00000357235 ADRM1Q16186 407 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms