RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 PAIP1Q9H074 479 aaKnown RBP16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 RIC1Q4ADV7 1423 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 NR5A2O00482 541 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 KDELR1P24390 212 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 RGS2P41220 211 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 C16orf72Q14CZ0 275 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 ACAP1Q15027 740 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 PRAMEF18Q5VWM3 479 aa16.04■□□□□ 0.16
TRAPPC11-202ENST00000357207 MAGEB16A2A368 324 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 WDR27A2RRH5 827 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 FCGR1AP12314 374 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 BST1Q10588 318 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 MAMLD1Q13495 774 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 KRT33BQ14525 404 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 C16orf46Q6P387 395 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 EP400NLQ6ZTU2 488 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 PATL1Q86TB9 770 aaKnown RBP16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 HORMAD1Q86X24 394 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 HTR3CQ8WXA8 447 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 OSBPL7Q9BZF2 842 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 GPAMQ9HCL2 828 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 TMEM161AQ9NX61 479 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 VTI1BQ9UEU0 232 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 CYP3A7-CYP3A51PA0A087WV96 503 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 CXCL8P10145 99 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 CYP3A7P24462 503 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 RBL1P28749 1068 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 ETFBP38117 255 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 ACCSLQ4AC99 568 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 GRTP1Q5TC63 336 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 MCM8Q9UJA3 840 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 CROTQ9UKG9 612 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 TSPAN16Q9UKR8 245 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 MGAT1P26572 445 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 BRSK2Q8IWQ3 736 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 SLITRK1Q96PX8 696 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 TTYH3Q9C0H2 523 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 A1CFQ9NQ94 594 aaKnown RBP16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 MYRFQ9Y2G1 1151 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 DNM1LO00429 736 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 CLOCKO15516 846 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 AP1G2O75843 785 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 SMNDC1O75940 238 aaKnown RBP eCLIP16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 RPL22P35268 128 aaKnown RBP16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 MLH1P40692 756 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 PGM5Q15124 567 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 TAF2Q6P1X5 1199 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 KCNT2Q6UVM3 1135 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 NET1Q7Z628 596 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 MAGEC3Q8TD91 643 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 DCUN1D5Q9BTE7 237 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 CEP41Q9BYV8 373 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 ELP3Q9H9T3 547 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 ERVK-5Q9HDB9 667 aa16.03■□□□□ 0.16
TRAPPC11-202ENST00000357207 MEIS2O14770 477 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 TGFB1I1O43294 461 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 PRKAA2P54646 552 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 LAMC2Q13753 1193 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 MFSD5Q6N075 450 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 CLVS1Q8IUQ0 354 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 BLOC1S5Q8TDH9 187 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 ACSS3Q9H6R3 686 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 PIH1D1Q9NWS0 290 aaKnown RBP16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 UBP1Q9NZI7 540 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 BARX2Q9UMQ3 279 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 VPS9D1Q9Y2B5 631 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 NCAM2O15394 837 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 PSMD10O75832 226 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 CALCAP01258 141 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 NNMTP40261 264 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 MRPS22P82650 360 aaKnown RBP16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 SLC25A3Q00325 362 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 LRRC74AQ0VAA2 488 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 BMT2Q1RMZ1 405 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 ZPBP2Q6X784 338 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 ALLCQ8N6M5 410 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 ZBTB45Q96K62 511 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 COPS7BQ9H9Q2 264 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 MYOZ2Q9NPC6 264 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 GPRC5DQ9NZD1 345 aa16.02■□□□□ 0.16
TRAPPC11-202ENST00000357207 CDH8P55286 799 aa16.02■□□□□ 0.15
TRAPPC11-202ENST00000357207 OTOAQ7RTW8 1153 aa16.02■□□□□ 0.15
TRAPPC11-202ENST00000357207 DCUN1D1Q96GG9 259 aa16.02■□□□□ 0.15
TRAPPC11-202ENST00000357207 KLK14Q9P0G3 267 aa16.02■□□□□ 0.15
TRAPPC11-202ENST00000357207 TNS2Q63HR2 1409 aa16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 CSDE1O75534 798 aaKnown RBP16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 ADRB2P07550 413 aa16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 MYL4P12829 197 aa16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 PGAM1P18669 254 aa16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 FECHP22830 423 aa16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 GTF2BQ00403 316 aa16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 GSTA3Q16772 222 aa16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 ZRANB3Q5FWF4 1079 aa16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 CHSY1Q86X52 802 aa16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 DHFR2Q86XF0 187 aa16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 USP6NLQ92738 828 aa16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 KLHL25Q9H0H3 589 aa16.01■□□□□ 0.15
TRAPPC11-202ENST00000357207 POLIQ9UNA4 740 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms