RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ADCY2Q08462 1091 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 KLF1Q13351 362 aaPredicted RBP18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 ERMARDQ5T6L9 678 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 WDR93Q6P2C0 686 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 ARHGAP18Q8N392 663 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 RUBCNQ92622 972 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 CASP10Q92851 521 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 LRRC1Q9BTT6 524 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 EMILIN2Q9BXX0 1053 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 SMOC2Q9H3U7 446 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 FAM204AQ9H8W3 233 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 TMPRSS4Q9NRS4 437 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 FBXW11Q9UKB1 542 aa18.89■□□□□ 0.61
SMARCD3-202ENST00000356800 OBSL1O75147 1896 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 LAMA3Q16787 3333 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 hCG_1818297A0A087WSY0 165 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 I6L893 689 aaPredicted RBP18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 KLRC2P26717 231 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 PTPN7P35236 360 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 COPS2P61201 443 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 C8orf74Q6P047 294 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 MSANTD2Q6P1R3 559 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 KCTD6Q8NC69 237 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 MAIP1Q8WWC4 291 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 MYRFLQ96LU7 910 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 PNKPQ96T60 521 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 KRT12Q99456 494 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 NKX2-4Q9H2Z4 354 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 SLITRK6Q9H5Y7 841 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 CERS4Q9HA82 394 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 ANLNQ9NQW6 1124 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 TLR8Q9NR97 1041 aaKnown RBP18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 MTMR10Q9NXD2 777 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 CLIC5Q9NZA1 410 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 SFMBT1Q9UHJ3 866 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 FZD10Q9ULW2 581 aa18.88■□□□□ 0.61
SMARCD3-202ENST00000356800 TRANK1O15050 2925 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 H3BNC9 293 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 CSH1P0DML2 217 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 CSH2P0DML3 217 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 CETN2P41208 172 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 CXCR3P49682 368 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 CDH6P55285 790 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 GPM6BQ13491 265 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 DPYSL3Q14195 570 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 TFDP3Q5H9I0 405 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 PRELID2Q8N945 189 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 FAM71BQ8TC56 605 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 PCDH18Q9HCL0 1135 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 AP4E1Q9UPM8 1137 aa18.87■□□□□ 0.61
SMARCD3-202ENST00000356800 IRAK2O43187 625 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 MSI1O43347 362 aaKnown RBP18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 F9P00740 461 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 RARGP13631 454 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 IL4RP24394 825 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 MCM3P25205 808 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 L1CAMP32004 1257 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 PSEN1P49768 467 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 MMRN1Q13201 1228 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 CYP1B1Q16678 543 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 ODF2Q5BJF6 829 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 DNAJB7Q7Z6W7 309 aaPredicted RBP18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 KREMEN2Q8NCW0 462 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 MICAL1Q8TDZ2 1067 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 RNF139Q8WU17 664 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 TRMT2BQ96GJ1 504 aaKnown RBP18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 DENND4CQ5VZ89 1909 aa18.86■□□□□ 0.61
SMARCD3-202ENST00000356800 TBX18O95935 607 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 GLUD1P00367 558 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 ADRA1BP35368 520 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 CLCN4P51793 760 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 EPHB3P54753 998 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 VEPH1Q14D04 833 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 DPYSL2Q16555 572 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 KAZNQ674X7 775 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 FBXO38Q6PIJ6 1188 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 KLHL7Q8IXQ5 586 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 PYROXD2Q8N2H3 581 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 PSMG2Q969U7 264 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 NTAN1Q96AB6 310 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 KCTD15Q96SI1 283 aaPredicted RBP18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 DDX47Q9H0S4 455 aaKnown RBP18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 DHX35Q9H5Z1 703 aaKnown RBP18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 ARGLU1Q9NWB6 273 aaPredicted RBP18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 STIM2Q9P246 746 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 R3HDM2Q9Y2K5 976 aaKnown RBP18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 CCDC151A5D8V7 595 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 CHRNA3P32297 505 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 PLD1Q13393 1074 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 KRT81Q14533 505 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 BRD3Q15059 726 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 PDK2Q15119 407 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 SNX30Q5VWJ9 437 aa18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 PSTKQ8IV42 348 aaKnown RBP18.85■□□□□ 0.61
SMARCD3-202ENST00000356800 C12orf50Q8NA57 414 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms