RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 FIGNQ5HY92 759 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 SPANXN3Q5MJ09 141 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 OR2W6PQ8NHA6 318 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 MAGEC3Q8TD91 643 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 OXCT2Q9BYC2 517 aaPredicted RBP6.64□□□□□ -1.35
UPF2-201ENST00000356352 TRIT1Q9H3H1 467 aaKnown RBP6.64□□□□□ -1.35
UPF2-201ENST00000356352 NMRAL1Q9HBL8 299 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 SLC40A1Q9NP59 571 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 GPRC5DQ9NZD1 345 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 NCKAP1Q9Y2A7 1128 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 LRRC7Q96NW7 1537 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 TSPOAP1O95153 1857 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 NCF1BA6NI72 391 aaPredicted RBP6.64□□□□□ -1.35
UPF2-201ENST00000356352 NCF1CA8MVU1 366 aaPredicted RBP6.64□□□□□ -1.35
UPF2-201ENST00000356352 NR5A2O00482 541 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 ZNF682O95780 498 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 GSTM1P09488 218 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 NCF1P14598 390 aaPredicted RBP6.64□□□□□ -1.35
UPF2-201ENST00000356352 ZNF7P17097 686 aaPredicted RBP6.64□□□□□ -1.35
UPF2-201ENST00000356352 TNNI3P19429 210 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 ATP6V1B2P21281 511 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 HPCAL1P37235 193 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 PSMC6P62333 389 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 SGCGQ13326 291 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 CCNG2Q16589 344 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 PDPK2PQ6A1A2 396 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 IKBIPQ70UQ0 350 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 ERO1BQ86YB8 467 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 WDR36Q8NI36 951 aaKnown RBP6.64□□□□□ -1.35
UPF2-201ENST00000356352 USP7Q93009 1102 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 CENPTQ96BT3 561 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 SGF29Q96ES7 293 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 MAGEB10Q96LZ2 347 aaPredicted RBP6.64□□□□□ -1.35
UPF2-201ENST00000356352 PACSIN1Q9BY11 444 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 CELF4Q9BZC1 486 aaKnown RBP6.64□□□□□ -1.35
UPF2-201ENST00000356352 ARHGEF3Q9NR81 526 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 ADPRHL2Q9NX46 363 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.64□□□□□ -1.35
UPF2-201ENST00000356352 HEY2Q9UBP5 337 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 FAM153AQ9UHL3 310 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 USP18Q9UMW8 372 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 PCDHB5Q9Y5E4 795 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 TMEM191CA6NGB0 347 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 HACD1B0YJ81 288 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 FAM25AB3EWG3 89 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 FAM25CB3EWG5 89 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 FAM25GB3EWG6 89 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 PPP1R3GB7ZBB8 358 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 RBAK-RBAKDNI3L0D1 243 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 CYP11B1P15538 503 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 KLRC1P26715 233 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 CCR1P32246 355 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 SREBF1P36956 1147 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 RFX3P48380 749 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 NR2C2P49116 596 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 EFEMP1Q12805 493 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 MPP3Q13368 585 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 ZCWPW2Q504Y3 356 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 GJC2Q5T442 439 aaPredicted RBP6.64□□□□□ -1.35
UPF2-201ENST00000356352 C11orf63Q6NUN7 778 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 CDC73Q6P1J9 531 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 ACOT1Q86TX2 421 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 EID3Q8N140 333 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 TMEM159Q96B96 161 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 RNFT2Q96EX2 444 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 VMP1Q96GC9 406 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 SERAC1Q96JX3 654 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 QRFPRQ96P65 431 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 PANX3Q96QZ0 392 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 APOL4Q9BPW4 351 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 DPY30Q9C005 99 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 ZCWPW1Q9H0M4 648 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 CLEC4MQ9H2X3 399 aaPredicted RBP6.64□□□□□ -1.35
UPF2-201ENST00000356352 CD163L1Q9NR16 1453 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 QRICH2Q9H0J4 1663 aa6.64□□□□□ -1.35
UPF2-201ENST00000356352 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 EIF4E1BA6NMX2 242 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 UBDO15205 165 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 CD3EAPO15446 510 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 XYLBO75191 536 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 MTA2O94776 668 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 PROSCO94903 275 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 NTSR2O95665 410 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 IGSF6O95976 241 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 CPA3P15088 417 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 NQO1P15559 274 aaKnown RBP6.63□□□□□ -1.35
UPF2-201ENST00000356352 PGAM1P18669 254 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 CAP2P40123 477 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 CDH17Q12864 832 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 PWP1Q13610 501 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 INAQ16352 499 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 RAD9BQ6WBX8 426 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SYTL1Q8IYJ3 562 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 NBPF15Q8N660 670 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 B3GALNT2Q8NCR0 500 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 KCNB2Q92953 911 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 SERPINB11Q96P15 392 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 PAFAH2Q99487 392 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 FAM118BQ9BPY3 351 aa6.63□□□□□ -1.35
UPF2-201ENST00000356352 UGT2B28Q9BY64 529 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms