RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 TRIM24O15164 1050 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 NDUFS2O75306 463 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 STC2O76061 302 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 HMBSP08397 361 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 PRCPP42785 496 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 NOVA1P51513 510 aaKnown RBP11.19□□□□□ -0.62
CAPN3-204ENST00000356316 YWHAGP61981 247 aaKnown RBP eCLIP11.19□□□□□ -0.62
CAPN3-204ENST00000356316 PNOCQ13519 176 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 STIM1Q13586 685 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 BECN1Q14457 450 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 MAP7D1Q3KQU3 841 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 UAP1L1Q3KQV9 507 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 ZCWPW2Q504Y3 356 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 TRIM61Q5EBN2 209 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 LYSMD4Q5XG99 296 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 PSAPL1Q6NUJ1 521 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 SCD5Q86SK9 330 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 FRMD1Q8N878 549 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 ANKRD52Q8NB46 1076 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 SLC4A11Q8NBS3 891 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 CEP76Q8TAP6 659 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 UCMAQ8WVF2 138 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 SEMA4DQ92854 862 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 SMARCE1Q969G3 411 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 GSDMAQ96QA5 445 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 HESX1Q9UBX0 185 aa11.19□□□□□ -0.62
CAPN3-204ENST00000356316 ARMCX3Q9UH62 379 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-204ENST00000356316 MBD1Q9UIS9 605 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-204ENST00000356316 PATE3B3GLJ2 98 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 PRRT4C9JH25 899 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 GREM1O60565 184 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 CFIP05156 583 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 GABRG2P18507 467 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 PTGER3P43115 390 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 MAPK8P45983 427 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 TKTL1P51854 596 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 RAD23BP54727 409 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 MCCD1P59942 119 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-204ENST00000356316 CETN1Q12798 172 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 STARD3Q14849 445 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 ST3GAL2Q16842 350 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 SGO2Q562F6 1265 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 EGFLAMQ63HQ2 1017 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 RABEPKQ7Z6M1 372 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 PIGZQ86VD9 579 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 DEFB119Q8N690 84 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 IPO4Q8TEX9 1081 aaKnown RBP11.18□□□□□ -0.62
CAPN3-204ENST00000356316 RNF139Q8WU17 664 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 TATDN2Q93075 761 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 IPO9Q96P70 1041 aaKnown RBP11.18□□□□□ -0.62
CAPN3-204ENST00000356316 SLC32A1Q9H598 525 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 LRRC4Q9HBW1 653 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 PLK2Q9NYY3 685 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 MARCH2Q9P0N8 246 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 CALCOCO1Q9P1Z2 691 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 EVLQ9UI08 416 aaPredicted RBP11.18□□□□□ -0.62
CAPN3-204ENST00000356316 KIAA1257Q9ULG3 409 aa11.18□□□□□ -0.62
CAPN3-204ENST00000356316 MYO18AQ92614 2054 aaKnown RBP11.18□□□□□ -0.62
CAPN3-204ENST00000356316 A0A1W2PQF6 199 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 SLC12A8A0AV02 714 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 GFRA2O00451 464 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 NPC1O15118 1278 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 SLC16A3O15427 465 aaKnown RBP11.17□□□□□ -0.62
CAPN3-204ENST00000356316 ZBED1O96006 694 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 CISD3P0C7P0 127 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 CEACAM1P13688 526 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 CD19P15391 556 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 ITPKAP23677 461 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 TBXAS1P24557 533 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-204ENST00000356316 CORO1AP31146 461 aaKnown RBP11.17□□□□□ -0.62
CAPN3-204ENST00000356316 HOXD12P35452 270 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 HARS2P49590 506 aaKnown RBP11.17□□□□□ -0.62
CAPN3-204ENST00000356316 ZNF132P52740 706 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 NUCB2P80303 420 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 ARID5AQ03989 594 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 LRRC63Q05C16 580 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 GFPT1Q06210 699 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-204ENST00000356316 ZNF33AQ06730 810 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 CUL2Q13617 745 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 DUOXA1Q1HG43 343 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 SYCP2LQ5T4T6 812 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 SH3PXD2AQ5TCZ1 1133 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 ARHGAP17Q68EM7 881 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 ANKRD40Q6AI12 368 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 SLC23A3Q6PIS1 610 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 Q6ZNB5 142 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 TOGARAM2Q6ZUX3 1019 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 DENND1CQ8IV53 801 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 RGL4Q8IZJ4 473 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 FMR1NBQ8N0W7 255 aaPredicted RBP11.17□□□□□ -0.62
CAPN3-204ENST00000356316 SIX6OS1Q8N1H7 587 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 HDDC3Q8N4P3 179 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 DDI1Q8WTU0 396 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 ERLEC1Q96DZ1 483 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 ACOX2Q99424 681 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 ARID3AQ99856 593 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 METTL14Q9HCE5 456 aaKnown RBP11.17□□□□□ -0.62
CAPN3-204ENST00000356316 OLA1Q9NTK5 396 aaKnown RBP11.17□□□□□ -0.62
CAPN3-204ENST00000356316 TMEM74BQ9NUR3 256 aa11.17□□□□□ -0.62
CAPN3-204ENST00000356316 CACNA2D2Q9NY47 1150 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms