RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 PRRG3Q9BZD7 231 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 ROPN1BQ9BZX4 212 aaPredicted RBP11.59□□□□□ -0.55
FN1-204ENST00000356005 ROPN1Q9HAT0 212 aaPredicted RBP11.59□□□□□ -0.55
FN1-204ENST00000356005 RGPD2P0DJD1 1756 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 VIRMAQ69YN4 1812 aaKnown RBP11.59□□□□□ -0.55
FN1-204ENST00000356005 UBR2Q8IWV8 1755 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 SCN11AQ9UI33 1791 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 MROH1Q8NDA8 1641 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 CLUHO75153 1309 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 GMNCA6NCL1 334 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 KBTBD12Q3ZCT8 623 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 CASP10Q92851 521 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 SENP8Q96LD8 212 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 SYT17Q9BSW7 474 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 CARD9Q9H257 536 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 TSPAN16Q9UKR8 245 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 SMIM22K7EJ46 135 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 GLUD1P00367 558 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 PTPN7P35236 360 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 CTCFP49711 727 aaPredicted RBP11.59□□□□□ -0.55
FN1-204ENST00000356005 CSTF3Q12996 717 aaKnown RBP11.59□□□□□ -0.55
FN1-204ENST00000356005 BEND6Q5SZJ8 279 aaPredicted RBP11.59□□□□□ -0.55
FN1-204ENST00000356005 ARMC12Q5T9G4 340 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 OTOAQ7RTW8 1153 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 CELF4Q9BZC1 486 aaKnown RBP11.59□□□□□ -0.55
FN1-204ENST00000356005 PRKD2Q9BZL6 878 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 ALG6Q9Y672 507 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 EIF4E1BA6NMX2 242 aaKnown RBP11.59□□□□□ -0.55
FN1-204ENST00000356005 TEX33O43247 280 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 FKBP9O95302 570 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 AGTP01019 485 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 FGFR1P11362 822 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 EIF4BP23588 611 aaKnown RBP11.59□□□□□ -0.55
FN1-204ENST00000356005 LVRNQ6Q4G3 990 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 FKBP9P1Q75LS8 142 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 NT5DC3Q86UY8 548 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 BLOC1S6Q9UL45 172 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 A0A0A6YYK5 440 aaPredicted RBP11.59□□□□□ -0.55
FN1-204ENST00000356005 H3BMM5 538 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 SERPINB10P48595 397 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 TUBP50607 506 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 ANTXR2P58335 489 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 MYL6P60660 151 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 GRM3Q14832 879 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 CYP4Z1Q86W10 505 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 SGSM3Q96HU1 749 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 KCTD10Q9H3F6 313 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 TBC1D14Q9P2M4 693 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 ZNF638Q14966 1978 aaKnown RBP11.59□□□□□ -0.55
FN1-204ENST00000356005 PDZK1P1A8MUH7 402 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 RBP1P09455 135 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 MYBL2P10244 700 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 TNNI3P19429 210 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 YWHAZP63104 245 aaKnown RBP11.59□□□□□ -0.55
FN1-204ENST00000356005 NUP93Q8N1F7 819 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 GAD1Q99259 594 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 ECSITQ9BQ95 431 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 GANQ9H2C0 597 aa11.59□□□□□ -0.55
FN1-204ENST00000356005 TMEM114B3SHH9 223 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 IFNA14P01570 189 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 MCL1Q07820 350 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 CBWD2Q8IUF1 395 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 CAMKK1Q8N5S9 505 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 UBA2Q9UBT2 640 aaPredicted RBP11.58□□□□□ -0.56
FN1-204ENST00000356005 PJA2O43164 708 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 HDCP19113 662 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 MED8Q96G25 268 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 ATP13A1Q9HD20 1204 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 ABCB6Q9NP58 842 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.58□□□□□ -0.56
FN1-204ENST00000356005 MICAL2O94851 1124 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 PCNAP12004 261 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 MLH1P40692 756 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 RANBP1P43487 201 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 CDC16Q13042 620 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 ZBTB17Q13105 803 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 HIC1Q14526 733 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 ZNF268Q14587 947 aaPredicted RBP11.58□□□□□ -0.56
FN1-204ENST00000356005 NOL9Q5SY16 702 aaKnown RBP11.58□□□□□ -0.56
FN1-204ENST00000356005 ATAD3BQ5T9A4 648 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 STARD8Q92502 1023 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 TBCBQ99426 244 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 INTS7Q9NVH2 962 aaKnown RBP11.58□□□□□ -0.56
FN1-204ENST00000356005 RBM22Q9NW64 420 aaKnown RBP eCLIP11.58□□□□□ -0.566e-8■■■□□ 18.3
FN1-204ENST00000356005 VANGL2Q9ULK5 521 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 SMIM35A0A1B0GVV1 85 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 LACTBL1A8MY62 500 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 RAD51BO15315 384 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 HS6ST1O60243 411 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 CYP3A4P08684 503 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 PNKPQ96T60 521 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 ATP13A3Q9H7F0 1226 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 INTS13Q9NVM9 706 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 HACD1B0YJ81 288 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 ZNF862O60290 1169 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 PGK1P00558 417 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 KLHL35Q6PF15 583 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 GLT6D1Q7Z4J2 308 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 AGR3Q8TD06 166 aa11.58□□□□□ -0.56
FN1-204ENST00000356005 CBWD1Q9BRT8 395 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms