RNA–Protein interactions for RNA: ENST00000355387.6

RNF220-202, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF220, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-202ENST00000355387 CCDC28BQ9BUN5 200 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 SNRNP25Q9BV90 132 aaKnown RBP13.41□□□□□ -0.26
RNF220-202ENST00000355387 CCDC106Q9BWC9 280 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 VCXQ9H320 206 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 NRDE2Q9H7Z3 1164 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 MINDY3Q9H8M7 445 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 THAP1Q9NVV9 213 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 HBS1LQ9Y450 684 aaKnown RBP13.41□□□□□ -0.26
RNF220-202ENST00000355387 DICER1Q9UPY3 1922 aaKnown RBP13.41□□□□□ -0.26
RNF220-202ENST00000355387 FAM237BA0A1B0GVD1 139 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 KLHL33A6NCF5 533 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 CXorf49A8MYA2 514 aaPredicted RBP13.41□□□□□ -0.26
RNF220-202ENST00000355387 CYP2C8P10632 490 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 MYL4P12829 197 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 AOC1P19801 751 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 PGM1P36871 562 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 FDFT1P37268 417 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 SLC10A6Q3KNW5 377 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 MAP1SQ66K74 1059 aaPredicted RBP13.41□□□□□ -0.26
RNF220-202ENST00000355387 CTAGE3PQ8IX95 158 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 SMYD2Q9NRG4 433 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 DDX43Q9NXZ2 648 aaKnown RBP13.41□□□□□ -0.26
RNF220-202ENST00000355387 MORF4L1Q9UBU8 362 aa13.41□□□□□ -0.26
RNF220-202ENST00000355387 LINGO3P0C6S8 592 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 OSTNP61366 133 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 INSCQ1MX18 579 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 C15orf59Q2T9L4 293 aaPredicted RBP13.4□□□□□ -0.26
RNF220-202ENST00000355387 TREML2Q5T2D2 321 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 C6orf163Q5TEZ5 329 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 ARHGAP17Q68EM7 881 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 PSTKQ8IV42 348 aaKnown RBP13.4□□□□□ -0.26
RNF220-202ENST00000355387 DHX37Q8IY37 1157 aaKnown RBP13.4□□□□□ -0.26
RNF220-202ENST00000355387 FAM172AQ8WUF8 416 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 KHSRPQ92945 711 aaKnown RBP eCLIP13.4□□□□□ -0.261e-7■■■□□ 17.7
RNF220-202ENST00000355387 NAT9Q9BTE0 207 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 ALG13Q9NP73 1137 aaKnown RBP13.4□□□□□ -0.26
RNF220-202ENST00000355387 ERAP1Q9NZ08 941 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 SF3B1O75533 1304 aaKnown RBP eCLIP13.4□□□□□ -0.265e-6■■■■■ 86.2
RNF220-202ENST00000355387 ANKRD33BA6NCL7 494 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 SPECC1L-ADORA2AF8WAN1 911 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 AVILO75366 819 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 CSH1P0DML2 217 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 CSH2P0DML3 217 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 HSF5Q4G112 596 aaPredicted RBP13.4□□□□□ -0.26
RNF220-202ENST00000355387 SH3PXD2AQ5TCZ1 1133 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 UNC93AQ86WB7 457 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 EGFL6Q8IUX8 553 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 STKLD1Q8NE28 680 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 UBA3Q8TBC4 463 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 SPATA33Q96N06 139 aa13.4□□□□□ -0.26
RNF220-202ENST00000355387 H0Y3Z8 333 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 CAPN9O14815 690 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 USP2O75604 605 aaPredicted RBP13.39□□□□□ -0.27
RNF220-202ENST00000355387 PIAS1O75925 651 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 APRTP07741 180 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 IQCF3P0C7M6 154 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 CHI3L2Q15782 390 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 GOLGA7BQ2TAP0 167 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 AAGABQ6PD74 315 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 NCAPG2Q86XI2 1143 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 TRIM50Q86XT4 487 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 SLC35F5Q8WV83 523 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 PRR11Q96HE9 360 aaPredicted RBP13.39□□□□□ -0.27
RNF220-202ENST00000355387 NR1H4Q96RI1 486 aaPredicted RBP13.39□□□□□ -0.27
RNF220-202ENST00000355387 PLEKHA5Q9HAU0 1116 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 DPP3Q9NY33 737 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 HMX2A2RU54 273 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 SDR42E2A6NKP2 422 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 GLRA3O75311 464 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 TBX10O75333 385 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 FKBP6O75344 327 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 CNMDO75829 334 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 CIB2O75838 187 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 KRT36O76013 467 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 NRLP54845 237 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 ACTR3P61158 418 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 SLC26A9Q7LBE3 791 aa13.39□□□□□ -0.27
RNF220-202ENST00000355387 MYLK4Q86YV6 388 aaPredicted RBP13.39□□□□□ -0.27
RNF220-202ENST00000355387 TAB3Q8N5C8 712 aaPredicted RBP13.39□□□□□ -0.27
RNF220-202ENST00000355387 PDCD7Q8N8D1 485 aaKnown RBP13.39□□□□□ -0.27
RNF220-202ENST00000355387 ASCC2Q9H1I8 757 aaPredicted RBP13.39□□□□□ -0.27
RNF220-202ENST00000355387 B2RBV5 119 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 MAP3K7O43318 606 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 CYP2F1P24903 491 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 L1CAMP32004 1257 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 HDAC4P56524 1084 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 NIPAL4Q0D2K0 466 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 STX3Q13277 289 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 ORC1Q13415 861 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 FRG1Q14331 258 aaKnown RBP13.38□□□□□ -0.27
RNF220-202ENST00000355387 TMCO4Q5TGY1 634 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 AP1ARQ63HQ0 302 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 TRIM68Q6AZZ1 485 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 TTC7BQ86TV6 843 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 ALYREFQ86V81 257 aaKnown RBP13.38□□□□□ -0.27
RNF220-202ENST00000355387 SCUBE1Q8IWY4 988 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 WDR60Q8WVS4 1066 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 NRG4Q8WWG1 115 aa13.38□□□□□ -0.27
RNF220-202ENST00000355387 SCG3Q8WXD2 468 aaKnown RBP13.38□□□□□ -0.27
RNF220-202ENST00000355387 ACAP3Q96P50 834 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms