RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 AS3MTQ9HBK9 375 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 DOCK1Q14185 1865 aa9.71□□□□□ -0.86
SMG6-202ENST00000354901 hCG_1818297A0A087WSY0 165 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 H3BSA7 217 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 SORBS2O94875 1100 aaKnown RBP9.7□□□□□ -0.86
SMG6-202ENST00000354901 FGFR1P11362 822 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 TUFMP49411 452 aaKnown RBP9.7□□□□□ -0.86
SMG6-202ENST00000354901 VCPP55072 806 aaKnown RBP9.7□□□□□ -0.86
SMG6-202ENST00000354901 TFDP3Q5H9I0 405 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 XRRA1Q6P2D8 792 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 CENPUQ71F23 418 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 WDTC1Q8N5D0 677 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 ALLCQ8N6M5 410 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 PYROXD1Q8WU10 500 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 RSAD2Q8WXG1 361 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 R3HDMLQ9H3Y0 253 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 MRGBPQ9NV56 204 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 IL1RAPL1Q9NZN1 696 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 PCDHGB4Q9UN71 923 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 AFG3L2Q9Y4W6 797 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 PCDHGB5Q9Y5G0 923 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 WDR81Q562E7 1941 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 TCRBV7S3A2A0A539 114 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 FCHO1O14526 889 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 ATP2A1O14983 1001 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 VILLO15195 856 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 B4GALT5O43286 388 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 GRAP2O75791 330 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 ASS1P00966 412 aaKnown RBP9.7□□□□□ -0.86
SMG6-202ENST00000354901 CALB1P05937 261 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 MYL2P10916 166 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 IL1R2P27930 398 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 TCF7P36402 384 aaPredicted RBP9.7□□□□□ -0.86
SMG6-202ENST00000354901 CD97P48960 835 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 CHN2P52757 468 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 PSMC1P62191 440 aaKnown RBP9.7□□□□□ -0.86
SMG6-202ENST00000354901 CLDN10P78369 228 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 LMNB2Q03252 620 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 GK3PQ14409 553 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 HIF1AQ16665 826 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 CDO1Q16878 200 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 MSS51Q4VC12 460 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 ZFP28Q8NHY6 868 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 PANX3Q96QZ0 392 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 MAK16Q9BXY0 300 aaKnown RBP9.7□□□□□ -0.86
SMG6-202ENST00000354901 NMUR2Q9GZQ4 415 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 LGALS13Q9UHV8 139 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 OXSR1O95747 527 aaPredicted RBP9.7□□□□□ -0.86
SMG6-202ENST00000354901 KRT3P12035 628 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 ARL2P36404 184 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 ZNF200P98182 395 aaPredicted RBP9.7□□□□□ -0.86
SMG6-202ENST00000354901 CD300CQ08708 224 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 NR1H3Q13133 447 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 MYLK3Q32MK0 819 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 PTPN20Q4JDL3 420 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 ITPRIPL1Q6GPH6 555 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 C3orf62Q6ZUJ4 267 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 ACAD11Q709F0 780 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 RFX6Q8HWS3 928 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 TMEM192Q8IY95 271 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 FAM71DQ8N9W8 422 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 RBM15BQ8NDT2 890 aaKnown RBP9.7□□□□□ -0.86
SMG6-202ENST00000354901 RIN3Q8TB24 985 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 UPF1Q92900 1129 aaKnown RBP eCLIP9.7□□□□□ -0.862e-7■■■■□ 25.6
SMG6-202ENST00000354901 VCPIP1Q96JH7 1222 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 PCYT2Q99447 389 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 NIF3L1Q9GZT8 377 aa9.7□□□□□ -0.86
SMG6-202ENST00000354901 FAM237BA0A1B0GVD1 139 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 SMIM31A0A1B0GVY4 71 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 FBP2O00757 339 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 PRKCBP05771 671 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 CDKN2BP42772 138 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 RASA2Q15283 850 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 DUOXA2Q1HG44 320 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 SLC45A4Q5BKX6 768 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 TCHHL1Q5QJ38 904 aaPredicted RBP9.69□□□□□ -0.86
SMG6-202ENST00000354901 FNBP1LQ5T0N5 605 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 ZNF280DQ6N043 979 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 NPNTQ6UXI9 565 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 BRSK2Q8IWQ3 736 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 ICA1LQ8NDH6 482 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 PAIP1Q9H074 479 aaKnown RBP9.69□□□□□ -0.86
SMG6-202ENST00000354901 NRBP2Q9NSY0 501 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 RABL2AQ9UBK7 228 aaPredicted RBP9.69□□□□□ -0.86
SMG6-202ENST00000354901 MAFBQ9Y5Q3 323 aaPredicted RBP9.69□□□□□ -0.86
SMG6-202ENST00000354901 STYXL1Q9Y6J8 313 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 TRMUO75648 421 aaKnown RBP9.69□□□□□ -0.86
SMG6-202ENST00000354901 ITGBL1O95965 494 aaPredicted RBP9.69□□□□□ -0.86
SMG6-202ENST00000354901 MAPK10P53779 464 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 PDK1Q15118 436 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 RAB6CQ53S08 254 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 HSP90AA5PQ58FG0 334 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 RNASEH2BQ5TBB1 312 aaKnown RBP9.69□□□□□ -0.86
SMG6-202ENST00000354901 EEF1DP3Q658K8 133 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 AMIGO2Q86SJ2 522 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 PALM2Q8IXS6 379 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 KIAA0319LQ8IZA0 1049 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 FNDC8Q8TC99 324 aa9.69□□□□□ -0.86
SMG6-202ENST00000354901 DQX1Q8TE96 717 aaKnown RBP9.69□□□□□ -0.86
SMG6-202ENST00000354901 RAB6CQ9H0N0 254 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms