RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PRPF6O94906 941 aaKnown RBP16.74■□□□□ 0.27
DDX55-202ENST00000354291 CEBPZQ03701 1054 aaKnown RBP16.74■□□□□ 0.27
DDX55-202ENST00000354291 DNAJC3Q13217 504 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 DUOXA2Q1HG44 320 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 KCNT1Q5JUK3 1230 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 PRAMEF14Q5SWL7 426 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 SNX30Q5VWJ9 437 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 RRAGBQ5VZM2 374 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 USP49Q70CQ1 688 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 ADAT2Q7Z6V5 191 aaKnown RBP16.74■□□□□ 0.27
DDX55-202ENST00000354291 FAM181AQ8N9Y4 354 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 CBWD1Q9BRT8 395 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 MARK1Q9P0L2 795 aa16.74■□□□□ 0.27
DDX55-202ENST00000354291 THAP10Q9P2Z0 257 aaPredicted RBP16.74■□□□□ 0.27
DDX55-202ENST00000354291 LSM7Q9UK45 103 aaKnown RBP16.74■□□□□ 0.27
DDX55-202ENST00000354291 MORC2Q9Y6X9 1032 aaPredicted RBP16.74■□□□□ 0.27
DDX55-202ENST00000354291 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.73■□□□□ 0.27
DDX55-202ENST00000354291 A8MXQ7 604 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 K7ELQ4 463 aaPredicted RBP16.73■□□□□ 0.27
DDX55-202ENST00000354291 ERVH48-1M5A8F1 160 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 GREM1O60565 184 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 TLR5O60602 858 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 PPP1R37O75864 691 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 LDOC1O95751 146 aaPredicted RBP16.73■□□□□ 0.27
DDX55-202ENST00000354291 GARTP22102 1010 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 PGFP49763 221 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 TUBP50607 506 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 ZNF132P52740 706 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 SLC5A3P53794 718 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 CDH8P55286 799 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 TLE3Q04726 772 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 RTP5Q14D33 572 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 L1TD1Q5T7N2 865 aaKnown RBP16.73■□□□□ 0.27
DDX55-202ENST00000354291 FAM173BQ6P4H8 233 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 SV2BQ7L1I2 683 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 GATAD2AQ86YP4 633 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 LURAP1LQ8IV03 231 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 SNIP1Q8TAD8 396 aaKnown RBP16.73■□□□□ 0.27
DDX55-202ENST00000354291 TMEM176AQ96HP8 235 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 CLIC6Q96NY7 704 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 MED10Q9BTT4 135 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 KLF16Q9BXK1 252 aaPredicted RBP16.73■□□□□ 0.27
DDX55-202ENST00000354291 NRSN2Q9GZP1 204 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 SEL1LQ9UBV2 794 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 PCDHGA1Q9Y5H4 931 aa16.73■□□□□ 0.27
DDX55-202ENST00000354291 STX6O43752 255 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 RFPL3O75679 317 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 GCNT3O95395 438 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 IGLV3-19P01714 112 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 ACSL1P33121 698 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 GRIA4P48058 902 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 GOLGA8FQ08AF8 430 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 GOLGA8DPQ0D2H9 430 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 SLC39A14Q15043 492 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 GEN1Q17RS7 908 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 HES3Q5TGS1 186 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 FMNL3Q8IVF7 1028 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 SPACA3Q8IXA5 215 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 B3GALNT2Q8NCR0 500 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 UCMAQ8WVF2 138 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 CNDP2Q96KP4 475 aaKnown RBP16.72■□□□□ 0.27
DDX55-202ENST00000354291 STRA6Q9BX79 667 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 PCED1AQ9H1Q7 454 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 MTMR6Q9Y217 621 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.72■□□□□ 0.27
DDX55-202ENST00000354291 NUMA1Q14980 2115 aa16.72■□□□□ 0.27
DDX55-202ENST00000354291 NPC1O15118 1278 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 BRINP1O60477 761 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 TACC1O75410 805 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 FSBPO95073 299 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 CST3P01034 146 aaPredicted RBP16.71■□□□□ 0.27
DDX55-202ENST00000354291 EPHX1P07099 455 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 ZDHHC11BP0C7U3 371 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 GAP43P17677 238 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 ACO1P21399 889 aaKnown RBP16.71■□□□□ 0.27
DDX55-202ENST00000354291 CTSKP43235 329 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 COPAP53621 1224 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 TNNC1P63316 161 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 KCNH2Q12809 1159 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 ORC1Q13415 861 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 CCDC73Q6ZRK6 1079 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 NAF1Q96HR8 494 aaKnown RBP16.71■□□□□ 0.27
DDX55-202ENST00000354291 USP28Q96RU2 1077 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 SEMA4CQ9C0C4 833 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 FOXD4L1Q9NU39 408 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 FBXO10Q9UK96 956 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 PCDHB13Q9Y5F0 798 aa16.71■□□□□ 0.27
DDX55-202ENST00000354291 MUC22E2RYF6 1773 aaPredicted RBP16.71■□□□□ 0.27
DDX55-202ENST00000354291 B8ZZF3 427 aa16.7■□□□□ 0.26
DDX55-202ENST00000354291 C1SP09871 688 aa16.7■□□□□ 0.26
DDX55-202ENST00000354291 CDK4P11802 303 aa16.7■□□□□ 0.26
DDX55-202ENST00000354291 PRKCHP24723 683 aa16.7■□□□□ 0.26
DDX55-202ENST00000354291 ACTN2P35609 894 aa16.7■□□□□ 0.26
DDX55-202ENST00000354291 ATP5C1P36542 298 aaKnown RBP16.7■□□□□ 0.26
DDX55-202ENST00000354291 MFAP3P55082 362 aa16.7■□□□□ 0.26
DDX55-202ENST00000354291 C21orf59P57076 290 aa16.7■□□□□ 0.26
DDX55-202ENST00000354291 LY6DQ14210 128 aa16.7■□□□□ 0.26
DDX55-202ENST00000354291 ZNF234Q14588 700 aa16.7■□□□□ 0.26
DDX55-202ENST00000354291 WDR72Q3MJ13 1102 aa16.7■□□□□ 0.26
DDX55-202ENST00000354291 TRAPPC11Q7Z392 1133 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms