RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CELF3Q5SZQ8 465 aaKnown RBP25.39■■□□□ 1.66
CPNE1-202ENST00000352393 POTEAQ6S8J7 498 aa25.39■■□□□ 1.66
CPNE1-202ENST00000352393 KBTBD2Q8IY47 623 aa25.39■■□□□ 1.66
CPNE1-202ENST00000352393 MPP5Q8N3R9 675 aa25.39■■□□□ 1.66
CPNE1-202ENST00000352393 NFKBIZQ9BYH8 718 aa25.39■■□□□ 1.66
CPNE1-202ENST00000352393 ASB7Q9H672 318 aa25.39■■□□□ 1.66
CPNE1-202ENST00000352393 PRMT7Q9NVM4 692 aaPredicted RBP25.39■■□□□ 1.66
CPNE1-202ENST00000352393 MARCOQ9UEW3 520 aaPredicted RBP25.39■■□□□ 1.66
CPNE1-202ENST00000352393 ASB3Q9Y575 518 aa25.39■■□□□ 1.66
CPNE1-202ENST00000352393 ZNF487B1APH4 448 aa25.39■■□□□ 1.65
CPNE1-202ENST00000352393 SPECC1L-ADORA2AF8WAN1 911 aa25.39■■□□□ 1.65
CPNE1-202ENST00000352393 NOP56O00567 594 aaKnown RBP25.39■■□□□ 1.65
CPNE1-202ENST00000352393 MDM4O15151 490 aa25.39■■□□□ 1.65
CPNE1-202ENST00000352393 MAP3K7O43318 606 aa25.39■■□□□ 1.65
CPNE1-202ENST00000352393 METTL18O95568 372 aa25.39■■□□□ 1.65
CPNE1-202ENST00000352393 DNAL1Q4LDG9 190 aa25.39■■□□□ 1.65
CPNE1-202ENST00000352393 MDH1BQ5I0G3 518 aa25.39■■□□□ 1.65
CPNE1-202ENST00000352393 ARCQ7LC44 396 aa25.39■■□□□ 1.65
CPNE1-202ENST00000352393 SCUBE1Q8IWY4 988 aa25.39■■□□□ 1.65
CPNE1-202ENST00000352393 STKLD1Q8NE28 680 aa25.39■■□□□ 1.65
CPNE1-202ENST00000352393 SLC16A10Q8TF71 515 aa25.39■■□□□ 1.65
CPNE1-202ENST00000352393 ANGPTL2Q9UKU9 493 aa25.39■■□□□ 1.65
CPNE1-202ENST00000352393 BRCA1P38398 1863 aaKnown RBP25.38■■□□□ 1.65
CPNE1-202ENST00000352393 WASHC5Q12768 1159 aa25.38■■□□□ 1.65
CPNE1-202ENST00000352393 OR52E8Q6IFG1 317 aa25.38■■□□□ 1.65
CPNE1-202ENST00000352393 EFCAB12Q6NXP0 572 aa25.38■■□□□ 1.65
CPNE1-202ENST00000352393 TIFABQ6ZNK6 161 aa25.38■■□□□ 1.65
CPNE1-202ENST00000352393 ULK2Q8IYT8 1036 aa25.38■■□□□ 1.65
CPNE1-202ENST00000352393 LRRN4Q8WUT4 740 aa25.38■■□□□ 1.65
CPNE1-202ENST00000352393 VCXQ9H320 206 aa25.38■■□□□ 1.65
CPNE1-202ENST00000352393 DLGAP2Q9P1A6 1054 aa25.38■■□□□ 1.65
CPNE1-202ENST00000352393 KIAA1257Q9ULG3 409 aa25.38■■□□□ 1.65
CPNE1-202ENST00000352393 PCDHA11Q9Y5I1 949 aa25.38■■□□□ 1.65
CPNE1-202ENST00000352393 GJA3Q9Y6H8 435 aa25.38■■□□□ 1.65
CPNE1-202ENST00000352393 SOCS7O14512 581 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 MAP3K13O43283 966 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 GCATO75600 419 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 SERPINA6P08185 405 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 KITP10721 976 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 RGS7P49802 495 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 TNFAIP2Q03169 654 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 DBN1Q16643 649 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 GOLGA7BQ2TAP0 167 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 MROH9Q5TGP6 573 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 RIPOR1Q6ZS17 1223 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 IFT43Q96FT9 208 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 ZNF184Q99676 751 aaPredicted RBP25.37■■□□□ 1.65
CPNE1-202ENST00000352393 FAM124BQ9H5Z6 455 aaPredicted RBP25.37■■□□□ 1.65
CPNE1-202ENST00000352393 NRDE2Q9H7Z3 1164 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 MAD1L1Q9Y6D9 718 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 DCAF8L1A6NGE4 600 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 FESP07332 822 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 AMHR2Q16671 573 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 FAM187BQ17R55 369 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 SLC10A6Q3KNW5 377 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 NCAPG2Q86XI2 1143 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 MYLK4Q86YV6 388 aaPredicted RBP25.37■■□□□ 1.65
CPNE1-202ENST00000352393 ADGRF2Q8IZF7 708 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 KHSRPQ92945 711 aaKnown RBP eCLIP25.37■■□□□ 1.658e-8■■■□□ 15.7
CPNE1-202ENST00000352393 PANX3Q96QZ0 392 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 SPATC1LQ9H0A9 340 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 PDZD7Q9H5P4 517 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 IFT122Q9HBG6 1241 aa25.37■■□□□ 1.65
CPNE1-202ENST00000352393 TRIP11Q15643 1979 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 STAU1O95793 577 aaKnown RBP25.36■■□□□ 1.65
CPNE1-202ENST00000352393 SDC4P31431 198 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 ACTR3P61158 418 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 KDSRQ06136 332 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 STX3Q13277 289 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 XAB2Q9HCS7 855 aaKnown RBP25.36■■□□□ 1.65
CPNE1-202ENST00000352393 SLC7A8Q9UHI5 535 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 PLXNA1Q9UIW2 1896 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 SDR42E2A6NKP2 422 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 CIB2O75838 187 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 TOP3BO95985 862 aaKnown RBP25.36■■□□□ 1.65
CPNE1-202ENST00000352393 CYP2F1P24903 491 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 ALDH18A1P54886 795 aaKnown RBP25.36■■□□□ 1.65
CPNE1-202ENST00000352393 TMEM132DQ14C87 1099 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 TTC39CQ8N584 583 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 DEPDC1BQ8WUY9 529 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 NT5C1AQ9BXI3 368 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 C1orf21Q9H246 121 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 THAP1Q9NVV9 213 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 SCOCQ9UIL1 159 aa25.36■■□□□ 1.65
CPNE1-202ENST00000352393 ENO4A6NNW6 628 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 PRR5-ARHGAP8B1AHC4 643 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 AHCYL1O43865 530 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 GSRP00390 522 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 CNTFP26441 200 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 SLC26A2P50443 739 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 HDAC4P56524 1084 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 ARHGAP8P85298 464 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 STILQ15468 1287 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 PKDCCQ504Y2 493 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 PMF1Q6P1K2 205 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 KYAT3Q6YP21 454 aaKnown RBP25.35■■□□□ 1.65
CPNE1-202ENST00000352393 ZCCHC23Q6ZST2 131 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 RFX8Q6ZV50 586 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 C12orf29Q8N999 325 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 AFG1LQ8WV93 481 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms