RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 HOXA2O43364 376 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 CD48P09326 243 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 ITIH2P19823 946 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 TYMPP19971 482 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 ACADSBP45954 432 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 ADCY1Q08828 1119 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 SDHAF4Q5VUM1 108 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 FUT10Q6P4F1 479 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 KATNAL2Q8IYT4 538 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 FAM172AQ8WUF8 416 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 ATG4AQ8WYN0 398 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 SMARCD1Q96GM5 515 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 PKMYT1Q99640 499 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 CNPY3Q9BT09 278 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.95□□□□□ -0.18
UBA3-201ENST00000349511 USP18Q9UMW8 372 aa13.95□□□□□ -0.18
UBA3-201ENST00000349511 DGKIO75912 1065 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 SDC4P31431 198 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 RPL34P49207 117 aaKnown RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 SNX16P57768 344 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 PITX1P78337 314 aaPredicted RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 CTXN3Q4LDR2 81 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 SPATA2LQ8IUW3 424 aaPredicted RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 LRRC43Q8N309 656 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 SNF8Q96H20 258 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 SERPINB12Q96P63 405 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 COLEC11Q9BWP8 271 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 MRPL9Q9BYD2 267 aaKnown RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 MAGEB5Q9BZ81 275 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 NSRP1Q9H0G5 558 aaKnown RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 TPX2Q9ULW0 747 aaKnown RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 CREB1P16220 341 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 IVDP26440 423 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 RDXP35241 583 aaKnown RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 GRIK1P39086 918 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 ALDH7A1P49419 539 aaKnown RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 MRPS5P82675 430 aaKnown RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 PTK6Q13882 451 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 LRRC14Q15048 493 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 TRIP13Q15645 432 aaPredicted RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 HADHQ16836 314 aaKnown RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 DCAF6Q58WW2 860 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 RTP2Q5QGT7 225 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 RSPO2Q6UXX9 243 aaPredicted RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 SLC26A9Q7LBE3 791 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 ZDHHC17Q8IUH5 632 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 SCN4BQ8IWT1 228 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 DEFB106AQ8N104 65 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 EXD1Q8NHP7 514 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 SCAMP5Q8TAC9 235 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 MGARPQ8TDB4 240 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 ARHGEF2Q92974 986 aaKnown RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 TOP1MTQ969P6 601 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 HAUS1Q96CS2 278 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 SLITRK1Q96PX8 696 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 OSBPL8Q9BZF1 889 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 HOMER3Q9NSC5 361 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 GPATCH2LQ9NWQ4 482 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 SLC12A4Q9UP95 1085 aa13.94□□□□□ -0.18
UBA3-201ENST00000349511 R3HDM2Q9Y2K5 976 aaKnown RBP13.94□□□□□ -0.18
UBA3-201ENST00000349511 YJEFN3A6XGL0 299 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 HHLA1C9JL84 531 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 E7ENQ6 273 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 C2CD2LO14523 706 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 OAZ2O95190 189 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 TRUB2O95900 331 aaKnown RBP13.93□□□□□ -0.18
UBA3-201ENST00000349511 GSTA1P08263 222 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 GPR15P49685 360 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 ITGA8P53708 1063 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 DYNLT1P63172 113 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 SYPL2Q5VXT5 272 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 PRSS55Q6UWB4 352 aaPredicted RBP13.93□□□□□ -0.18
UBA3-201ENST00000349511 SYDE1Q6ZW31 735 aaPredicted RBP13.93□□□□□ -0.18
UBA3-201ENST00000349511 TRPM8Q7Z2W7 1104 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 TTC9BQ8N6N2 239 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 ADAM32Q8TC27 787 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 GPR152Q8TDT2 470 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 DYDC1Q8WWB3 177 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 MAIP1Q8WWC4 291 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 KCTD13Q8WZ19 329 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 DCLK3Q9C098 648 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 DNAJC17Q9NVM6 304 aaKnown RBP13.93□□□□□ -0.18
UBA3-201ENST00000349511 CTNNAL1Q9UBT7 734 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 NAALADL1Q9UQQ1 740 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 NLRC5Q86WI3 1866 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 TMEM120BA0PK00 339 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 ARHGEF37A1IGU5 675 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 ZBBXA8MT70 800 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 SNX3O60493 162 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 SOAT2O75908 522 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 HDAC4P56524 1084 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 ELF3P78545 371 aaPredicted RBP13.93□□□□□ -0.18
UBA3-201ENST00000349511 DDR2Q16832 855 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 ZC3H12AQ5D1E8 599 aaKnown RBP13.93□□□□□ -0.18
UBA3-201ENST00000349511 VSTM1Q6UX27 236 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 ATAD1Q8NBU5 361 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 KCTD6Q8NC69 237 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 TBCBQ99426 244 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 NCAPGQ9BPX3 1015 aa13.93□□□□□ -0.18
UBA3-201ENST00000349511 CWH43Q9H720 699 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms