RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 ATP9BO43861 1147 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 E2F6O75461 281 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 PTPN1P18031 435 aaKnown RBP15.66■□□□□ 0.1
PTBP1-201ENST00000349038 ADSSP30520 456 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 GNA15P30679 374 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 PHEXP78562 749 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 MAMLD1Q13495 774 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 DCAF6Q58WW2 860 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 TRAPPC3LQ5T215 181 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 POTEHQ6S545 545 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 B3GNT9Q6UX72 402 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 MIER3Q7Z3K6 550 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 PPIL6Q8IXY8 311 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 TNS4Q8IZW8 715 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 DDX1Q92499 740 aaKnown RBP15.66■□□□□ 0.1
PTBP1-201ENST00000349038 PGLYRP2Q96PD5 576 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 UNC45AQ9H3U1 944 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 WDR55Q9H6Y2 383 aaPredicted RBP15.66■□□□□ 0.1
PTBP1-201ENST00000349038 TMEM206Q9H813 350 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 ZNF358Q9NW07 568 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 ZC3H7BQ9UGR2 993 aaKnown RBP15.66■□□□□ 0.1
PTBP1-201ENST00000349038 COQ6Q9Y2Z9 468 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 C1orf232A0A0U1RR37 186 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 CCDC78A2IDD5 438 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 GRIN3BO60391 1043 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 TAF5Q15542 800 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 TRMT10BQ6PF06 316 aaKnown RBP15.66■□□□□ 0.1
PTBP1-201ENST00000349038 NLRP7Q8WX94 980 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 DCPSQ96C86 337 aaKnown RBP15.66■□□□□ 0.1
PTBP1-201ENST00000349038 SLITRK1Q96PX8 696 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 CCDC106Q9BWC9 280 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 ARHGEF37A1IGU5 675 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 TMEM221A6NGB7 291 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 A6NL46 340 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 K7EPI3 171 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 CASQ2O14958 399 aaPredicted RBP15.65■□□□□ 0.1
PTBP1-201ENST00000349038 MAPTP10636 758 aaKnown RBP15.65■□□□□ 0.1
PTBP1-201ENST00000349038 EIF2AK2P19525 551 aaKnown RBP15.65■□□□□ 0.1
PTBP1-201ENST00000349038 PGGT1BP53609 377 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 GNA12Q03113 381 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 BNIP3Q12983 259 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 ITGA9Q13797 1035 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 WDR44Q5JSH3 913 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 GPR107Q5VW38 600 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 NUF2Q9BZD4 464 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 SMYD2Q9NRG4 433 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 C20orf96Q9NUD7 363 aaPredicted RBP15.65■□□□□ 0.1
PTBP1-201ENST00000349038 TBC1D23Q9NUY8 699 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 BTAF1O14981 1849 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 ATRNL1Q5VV63 1379 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 CD19P15391 556 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 XRCC1P18887 633 aaPredicted RBP15.65■□□□□ 0.1
PTBP1-201ENST00000349038 HOXA10P31260 410 aaPredicted RBP15.65■□□□□ 0.1
PTBP1-201ENST00000349038 DNAJC24Q6P3W2 148 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 TDRPQ86YL5 185 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 HELQQ8TDG4 1101 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 ALKBH8Q96BT7 664 aaKnown RBP15.65■□□□□ 0.1
PTBP1-201ENST00000349038 ACCSQ96QU6 501 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 PKP2Q99959 881 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 LRRC37AA6NMS7 1700 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 A0A0B4J269 797 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 G3V3G9 751 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 ETV4P43268 484 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 RELAQ04206 551 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 DCAF8Q5TAQ9 597 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 SCYL2Q6P3W7 929 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 NUP93Q8N1F7 819 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 CXorf38Q8TB03 319 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 CASP10Q92851 521 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 CIB1Q99828 191 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 HEPHQ9BQS7 1158 aa15.65■□□□□ 0.1
PTBP1-201ENST00000349038 HTR3EA5X5Y0 456 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 DDTLA6NHG4 134 aaPredicted RBP15.64■□□□□ 0.09
PTBP1-201ENST00000349038 ITGAXP20702 1163 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 RCVRNP35243 200 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 MMRN1Q13201 1228 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 NME3Q13232 169 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 BTG3Q14201 252 aaPredicted RBP15.64■□□□□ 0.09
PTBP1-201ENST00000349038 NEDD8Q15843 81 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 SLC9A4Q6AI14 798 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 CES3Q6UWW8 571 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 PRR23BQ6ZRT6 265 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 TMEM179Q6ZVK1 233 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 SNX32Q86XE0 403 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 SLC15A3Q8IY34 581 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.64■□□□□ 0.096e-7■■□□□ 12.6
PTBP1-201ENST00000349038 SPATA18Q8TC71 538 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 MPHOSPH6Q99547 160 aaKnown RBP15.64■□□□□ 0.09
PTBP1-201ENST00000349038 WDR11Q9BZH6 1224 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 SLC9A2Q9UBY0 812 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 CIDEBQ9UHD4 219 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 A0A1W2PPW3 197 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 PLSCR1O15162 318 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 SERPINA6P08185 405 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 SNRPAP09012 282 aaKnown RBP15.64■□□□□ 0.09
PTBP1-201ENST00000349038 CPOXP36551 454 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 CLCN2P51788 898 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 PPM1JQ5JR12 505 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 CIAPIN1Q6FI81 312 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 KCNT2Q6UVM3 1135 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms