RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 MRPL1Q9BYD6 325 aaKnown RBP19.3■□□□□ 0.68
SCARF1-202ENST00000348987 SIRPGQ9P1W8 387 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 IP6K2Q9UHH9 426 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 SH3GLB1Q9Y371 365 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 KAT6AQ92794 2004 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 DENRO43583 198 aaKnown RBP19.3■□□□□ 0.68
SCARF1-202ENST00000348987 WEE2P0C1S8 567 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 CDKN2BP42772 138 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 COPAP53621 1224 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 RPL26P61254 145 aaKnown RBP19.3■□□□□ 0.68
SCARF1-202ENST00000348987 ZNF252P-AS1Q0IIN9 211 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 MTA1Q13330 715 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 MPP3Q13368 585 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 TMEM132BQ14DG7 1078 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 NSUN6Q8TEA1 469 aaKnown RBP19.3■□□□□ 0.68
SCARF1-202ENST00000348987 ZNF711Q9Y462 761 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 HEMK1Q9Y5R4 338 aaPredicted RBP19.3■□□□□ 0.68
SCARF1-202ENST00000348987 SCINQ9Y6U3 715 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 WDR81Q562E7 1941 aa19.3■□□□□ 0.68
SCARF1-202ENST00000348987 PEX1O43933 1283 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 TRMUO75648 421 aaKnown RBP19.29■□□□□ 0.68
SCARF1-202ENST00000348987 FUT4P22083 530 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 PPIDQ08752 370 aaKnown RBP19.29■□□□□ 0.68
SCARF1-202ENST00000348987 OGFRL1Q5TC84 451 aaPredicted RBP19.29■□□□□ 0.68
SCARF1-202ENST00000348987 PPM1NQ8N819 430 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 RSAD2Q8WXG1 361 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 PARVAQ9NVD7 372 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 TMEM221A6NGB7 291 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 AVILO75366 819 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 BACE1P56817 501 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 MYBPC1Q00872 1141 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 CNGA3Q16281 694 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 ZNF394Q53GI3 561 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 DEFB107AQ8IZN7 70 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 PPP1R14BQ96C90 147 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 ZFRQ96KR1 1074 aaKnown RBP19.29■□□□□ 0.68
SCARF1-202ENST00000348987 WRNIP1Q96S55 665 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 MMP19Q99542 508 aa19.29■□□□□ 0.68
SCARF1-202ENST00000348987 MRPS26Q9BYN8 205 aaKnown RBP19.29■□□□□ 0.68
SCARF1-202ENST00000348987 SF3B1O75533 1304 aaKnown RBP eCLIP19.28■□□□□ 0.682e-14■■■■■ 172.3
SCARF1-202ENST00000348987 LOC100653049A0A140TA62 436 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 KRT34O76011 436 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 CST3P01034 146 aaPredicted RBP19.28■□□□□ 0.68
SCARF1-202ENST00000348987 VARSP26640 1264 aaKnown RBP19.28■□□□□ 0.68
SCARF1-202ENST00000348987 TTC39BQ5VTQ0 682 aaPredicted RBP19.28■□□□□ 0.68
SCARF1-202ENST00000348987 UNC45BQ8IWX7 931 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 RIN3Q8TB24 985 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 A0A0B4J269 797 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 ARHGAP10A1A4S6 786 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 BOLA2-SMG1P6H3BVE0 249 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 SNNO75324 88 aaPredicted RBP19.28■□□□□ 0.68
SCARF1-202ENST00000348987 IRX4P78413 519 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 TUBB3Q13509 450 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 BMPR2Q13873 1038 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 KBTBD6Q86V97 674 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 ACTRT2Q8TDY3 377 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 MCEEQ96PE7 176 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 MSTO1Q9BUK6 570 aa19.28■□□□□ 0.68
SCARF1-202ENST00000348987 K7ERI5 159 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 CRTAMO95727 393 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 SRGAP2CP0DJJ0 459 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 SRGAP2BP0DMP2 458 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 WASHC5Q12768 1159 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 ZNF410Q86VK4 478 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 SLC26A11Q86WA9 606 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 NUP93Q8N1F7 819 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 SSX2IPQ9Y2D8 614 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 CXorf49A8MYA2 514 aaPredicted RBP19.27■□□□□ 0.68
SCARF1-202ENST00000348987 MAFGO15525 162 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 ADCY3O60266 1144 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 LYPLA1O75608 230 aaPredicted RBP19.27■□□□□ 0.68
SCARF1-202ENST00000348987 ZNF189O75820 626 aaPredicted RBP19.27■□□□□ 0.68
SCARF1-202ENST00000348987 ZMPSTE24O75844 475 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 TNFAIP8O95379 198 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 TOP3BO95985 862 aaKnown RBP19.27■□□□□ 0.68
SCARF1-202ENST00000348987 CD48P09326 243 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 TNFSF9P41273 254 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 OGDHQ02218 1023 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 STX3Q13277 289 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 KRT81Q14533 505 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 XKR3Q5GH77 459 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 ANGEL2Q5VTE6 544 aaKnown RBP19.27■□□□□ 0.68
SCARF1-202ENST00000348987 FAM71DQ8N9W8 422 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 ZNF606Q8WXB4 792 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 CFAP36Q96G28 342 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 SIKE1Q9BRV8 207 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 PACSIN3Q9UKS6 424 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 PAIP2BQ9ULR5 123 aaKnown RBP19.27■□□□□ 0.68
SCARF1-202ENST00000348987 AGTPBP1Q9UPW5 1226 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 AP4B1Q9Y6B7 739 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 STYXL1Q9Y6J8 313 aa19.27■□□□□ 0.68
SCARF1-202ENST00000348987 TMEM191CA6NGB0 347 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 TMEM191BP0C7N4 346 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 ACAP1Q15027 740 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 PHF13Q86YI8 300 aaPredicted RBP19.26■□□□□ 0.67
SCARF1-202ENST00000348987 LRRC43Q8N309 656 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 FNDC8Q8TC99 324 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 MAML3Q96JK9 1138 aa19.26■□□□□ 0.67
SCARF1-202ENST00000348987 XAB2Q9HCS7 855 aaKnown RBP19.26■□□□□ 0.67
SCARF1-202ENST00000348987 SORCS3Q9UPU3 1222 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms