RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ADAM15Q13444 863 aa28.2■■■□□ 2.1
SSBP4-202ENST00000348495 TXNRD3NBQ6F5E7 133 aa28.2■■■□□ 2.1
SSBP4-202ENST00000348495 POLNQ7Z5Q5 900 aa28.2■■■□□ 2.1
SSBP4-202ENST00000348495 RHOT1Q8IXI2 618 aa28.2■■■□□ 2.1
SSBP4-202ENST00000348495 NOTCH4Q99466 2003 aa28.2■■■□□ 2.1
SSBP4-202ENST00000348495 DOCK6Q96HP0 2047 aa28.19■■■□□ 2.1
SSBP4-202ENST00000348495 SPDYE4A6NLX3 237 aa28.19■■■□□ 2.1
SSBP4-202ENST00000348495 FGF19O95750 216 aa28.19■■■□□ 2.1
SSBP4-202ENST00000348495 RHOP08100 348 aa28.19■■■□□ 2.1
SSBP4-202ENST00000348495 CCR2P41597 374 aa28.19■■■□□ 2.1
SSBP4-202ENST00000348495 NME3Q13232 169 aa28.19■■■□□ 2.1
SSBP4-202ENST00000348495 C10orf120Q5SQS8 335 aa28.19■■■□□ 2.1
SSBP4-202ENST00000348495 ALG3Q92685 438 aa28.19■■■□□ 2.1
SSBP4-202ENST00000348495 C2orf78A6NCI8 922 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 COCHO43405 550 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 MYL4P12829 197 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 SSR1P43307 286 aaKnown RBP28.18■■■□□ 2.1
SSBP4-202ENST00000348495 CXCR3P49682 368 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 TADA2BQ86TJ2 420 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 SERPINB11Q96P15 392 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 MARCH2Q9P0N8 246 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 PCSK1NQ9UHG2 260 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 MDM4O15151 490 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 GBP1P32455 592 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 AMPD2Q01433 879 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 EFEMP1Q12805 493 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 NNTQ13423 1086 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 COL19A1Q14993 1142 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 HADHQ16836 314 aaKnown RBP28.18■■■□□ 2.1
SSBP4-202ENST00000348495 ANKRD54Q6NXT1 300 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 FAM131BQ86XD5 332 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 SMG7Q92540 1137 aaKnown RBP28.18■■■□□ 2.1
SSBP4-202ENST00000348495 TMEM51Q9NW97 253 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.18■■■□□ 2.19e-7■■■■□ 19.7
SSBP4-202ENST00000348495 SNX12Q9UMY4 172 aa28.18■■■□□ 2.1
SSBP4-202ENST00000348495 SYNJ2BP-COX16A0A087WUM0 186 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 A0A1W2PRU2 124 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 MSI1O43347 362 aaKnown RBP28.17■■■□□ 2.1
SSBP4-202ENST00000348495 PRPSAP2O60256 369 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 MOSPD3O75425 235 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 OLFM2O95897 454 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 ATP5C1P36542 298 aaKnown RBP28.17■■■□□ 2.1
SSBP4-202ENST00000348495 CTC1Q2NKJ3 1217 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 PRSS36Q5K4E3 855 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 TMC5Q6UXY8 1006 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 PDZD4Q76G19 769 aaPredicted RBP28.17■■■□□ 2.1
SSBP4-202ENST00000348495 GRASPQ7Z6J2 395 aaPredicted RBP28.17■■■□□ 2.1
SSBP4-202ENST00000348495 UBL4BQ8N7F7 174 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 KIF18AQ8NI77 898 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 SHKBP1Q8TBC3 707 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 ZNF592Q92610 1267 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 ATXN3LQ9H3M9 355 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 COX16Q9P0S2 106 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 DNMT3LQ9UJW3 386 aa28.17■■■□□ 2.1
SSBP4-202ENST00000348495 SRGAP2BP0DMP2 458 aa28.16■■■□□ 2.1
SSBP4-202ENST00000348495 PRLRP16471 622 aa28.16■■■□□ 2.1
SSBP4-202ENST00000348495 SLC5A9Q2M3M2 681 aa28.16■■■□□ 2.1
SSBP4-202ENST00000348495 ATP13A4Q4VNC1 1196 aa28.16■■■□□ 2.1
SSBP4-202ENST00000348495 SCYL2Q6P3W7 929 aa28.16■■■□□ 2.1
SSBP4-202ENST00000348495 SYCE2Q6PIF2 218 aa28.16■■■□□ 2.1
SSBP4-202ENST00000348495 MRPS31Q92665 395 aaKnown RBP28.16■■■□□ 2.1
SSBP4-202ENST00000348495 SLC39A13Q96H72 371 aa28.16■■■□□ 2.1
SSBP4-202ENST00000348495 FAM161BQ96MY7 647 aa28.16■■■□□ 2.1
SSBP4-202ENST00000348495 RNF38Q9H0F5 515 aa28.16■■■□□ 2.1
SSBP4-202ENST00000348495 TLR6Q9Y2C9 796 aa28.16■■■□□ 2.1
SSBP4-202ENST00000348495 SBDSQ9Y3A5 250 aaKnown RBP eCLIP28.16■■■□□ 2.1
SSBP4-202ENST00000348495 KRT7P08729 469 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 DNA2P51530 1060 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 NTHL1P78549 312 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 CYP4F8P98187 520 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 BOLA3Q53S33 107 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 DCAF12L1Q5VU92 463 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 TXNDC8Q6A555 127 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 KATNAL2Q8IYT4 538 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 CCDC185Q8N715 623 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 TEKT4Q8WW24 435 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 TCEAL4Q96EI5 215 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 GCNAQ96QF7 691 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 CLEC1BQ9P126 229 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 RASAL2Q9UJF2 1139 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 IGLV3-27P01718 113 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 RARAP10276 462 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 HOXB8P17481 243 aaPredicted RBP28.15■■■□□ 2.1
SSBP4-202ENST00000348495 TRIP4Q15650 581 aaPredicted RBP28.15■■■□□ 2.1
SSBP4-202ENST00000348495 GPR149Q86SP6 731 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 MIB1Q86YT6 1006 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 NTAN1Q96AB6 310 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 ZWILCHQ9H900 591 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 PIDD1Q9HB75 910 aa28.15■■■□□ 2.1
SSBP4-202ENST00000348495 GJA1P17302 382 aa28.14■■■□□ 2.1
SSBP4-202ENST00000348495 PFKLP17858 780 aa28.14■■■□□ 2.1
SSBP4-202ENST00000348495 IGFBP4P22692 258 aa28.14■■■□□ 2.1
SSBP4-202ENST00000348495 PPP2R5DQ14738 602 aa28.14■■■□□ 2.1
SSBP4-202ENST00000348495 SMTNL2Q2TAL5 461 aa28.14■■■□□ 2.1
SSBP4-202ENST00000348495 KCNT1Q5JUK3 1230 aa28.14■■■□□ 2.1
SSBP4-202ENST00000348495 RARS2Q5T160 578 aaKnown RBP28.14■■■□□ 2.1
SSBP4-202ENST00000348495 GPR153Q6NV75 609 aa28.14■■■□□ 2.1
SSBP4-202ENST00000348495 SND1Q7KZF4 910 aaKnown RBP eCLIP28.14■■■□□ 2.1
SSBP4-202ENST00000348495 SLC22A12Q96S37 553 aa28.14■■■□□ 2.1
SSBP4-202ENST00000348495 OSBPL9Q96SU4 736 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms