RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 CEP295NLQ96MC4 621 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 FAM118BQ9BPY3 351 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 DNPEPQ9ULA0 475 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 ZNF148Q9UQR1 794 aa19.41■□□□□ 0.7
PTN-201ENST00000348225 GJB5O95377 273 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 URODP06132 367 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 ZFXP17010 805 aaPredicted RBP19.4■□□□□ 0.7
PTN-201ENST00000348225 TGM2P21980 687 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 ARL4AP40617 200 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 OTUD4Q01804 1114 aaKnown RBP19.4■□□□□ 0.7
PTN-201ENST00000348225 SDHAF4Q5VUM1 108 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 MON1AQ86VX9 555 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 DDX42Q86XP3 938 aaKnown RBP eCLIP19.4■□□□□ 0.7
PTN-201ENST00000348225 C7orf61Q8IZ16 206 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 TTC9BQ8N6N2 239 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 ADAM32Q8TC27 787 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 ACTL9Q8TC94 416 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 CCHCR1Q8TD31 782 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 KCTD15Q96SI1 283 aaPredicted RBP19.4■□□□□ 0.7
PTN-201ENST00000348225 PRDM16Q9HAZ2 1276 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.4■□□□□ 0.7
PTN-201ENST00000348225 IL37Q9NZH6 218 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 ASIC3Q9UHC3 531 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 SLC27A5Q9Y2P5 690 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 PCDHB12Q9Y5F1 795 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 KIAA1671Q9BY89 1806 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 WDR27A2RRH5 827 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 C2CD2LO14523 706 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 MCF2LO15068 1137 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 ITGAVP06756 1048 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 IL4RP24394 825 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 OR1D2P34982 312 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 HTRA4P83105 476 aaPredicted RBP19.4■□□□□ 0.7
PTN-201ENST00000348225 SCAPQ12770 1279 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 DUSP4Q13115 394 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 TRADDQ15628 312 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 TAC4Q86UU9 113 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 FIBCD1Q8N539 461 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 CCDC89Q8N998 374 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 SLC35B2Q8TB61 432 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 DQX1Q8TE96 717 aaKnown RBP19.4■□□□□ 0.7
PTN-201ENST00000348225 RNF139Q8WU17 664 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 P3H4Q92791 437 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 ZBED2Q9BTP6 218 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 FUT8Q9BYC5 575 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 FAM129AQ9BZQ8 928 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 WDR6Q9NNW5 1121 aaKnown RBP19.4■□□□□ 0.7
PTN-201ENST00000348225 FBXW11Q9UKB1 542 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 SNX24Q9Y343 169 aa19.4■□□□□ 0.7
PTN-201ENST00000348225 H3BRJ5 948 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 VNN2O95498 520 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 YWHAQP27348 245 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 ADRA1BP35368 520 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 TUFMP49411 452 aaKnown RBP19.39■□□□□ 0.69
PTN-201ENST00000348225 CASP8Q14790 479 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 OASLQ15646 514 aaKnown RBP19.39■□□□□ 0.69
PTN-201ENST00000348225 TPGS2Q68CL5 300 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 SLC9A4Q6AI14 798 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 SCD5Q86SK9 330 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 PCDH19Q8TAB3 1148 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 SMOC2Q9H3U7 446 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 MTMR10Q9NXD2 777 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 HSFX1Q9UBD0 423 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 AFF4Q9UHB7 1163 aaKnown RBP19.39■□□□□ 0.69
PTN-201ENST00000348225 INSL6Q9Y581 213 aa19.39■□□□□ 0.69
PTN-201ENST00000348225 MKI67P46013 3256 aaKnown RBP19.38■□□□□ 0.69
PTN-201ENST00000348225 A0A1W2PQH9 124 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 FAM92AA1XBS5 289 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 ADAM12O43184 909 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 IGLV3-25P01717 112 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 RPL17P18621 184 aaKnown RBP19.38■□□□□ 0.69
PTN-201ENST00000348225 ECHS1P30084 290 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 CXCR3P49682 368 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 PSEN1P49768 467 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 CALCOCO2Q13137 446 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 ALLCQ8N6M5 410 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 FBXO32Q969P5 355 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 CSPG4P5Q96PW8 444 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 CLSTN3Q9BQT9 956 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 CRISPLD1Q9H336 500 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 ACBD3Q9H3P7 528 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 WDCPQ9H6R7 721 aa19.38■□□□□ 0.69
PTN-201ENST00000348225 SOAT2O75908 522 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 ATF2P15336 505 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 RPL21P46778 160 aaKnown RBP19.37■□□□□ 0.69
PTN-201ENST00000348225 ZNF135P52742 658 aaPredicted RBP19.37■□□□□ 0.69
PTN-201ENST00000348225 EIF3EP60228 445 aaKnown RBP19.37■□□□□ 0.69
PTN-201ENST00000348225 CREMQ03060 361 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 NOMO1Q15155 1222 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 TMEM240Q5SV17 173 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 GPR65Q8IYL9 337 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 PQLC3Q8N755 202 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 PLD5Q8N7P1 536 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 RNF34Q969K3 372 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 SNF8Q96H20 258 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 NMUR1Q9HB89 426 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.37■□□□□ 0.69
PTN-201ENST00000348225 WHRNQ9P202 907 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 PCDH10Q9P2E7 1040 aa19.37■□□□□ 0.69
PTN-201ENST00000348225 SAE1Q9UBE0 346 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms