RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 C2CD6Q53TS8 623 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 CASP12Q6UXS9 341 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 ARRDC4Q8NCT1 418 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 BBS4Q96RK4 519 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 STARD7Q9NQZ5 370 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 LOC100653049A0A140TA62 436 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 C17orf102A2RUQ5 167 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 RRN3P2A6NIE6 340 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 KRT34O76011 436 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 S100A1P23297 94 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 DTNBP1Q96EV8 351 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 ZNF512BQ96KM6 892 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-201ENST00000347662 PPP1R2P1Q96PQ5 205 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 PLA2G4CQ9UP65 541 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 EFR3BQ9Y2G0 817 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 LYVE1Q9Y5Y7 322 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 LYNP07948 512 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 CTSEP14091 401 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 CCNG1P51959 295 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 SEZ6Q53EL9 994 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 ATF7IP2Q5U623 682 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 ARHGEF26Q96DR7 871 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 KCNS3Q9BQ31 491 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 DDX47Q9H0S4 455 aaKnown RBP12.12□□□□□ -0.47
TRAF3-201ENST00000347662 DBR1Q9UK59 544 aaKnown RBP12.12□□□□□ -0.47
TRAF3-201ENST00000347662 B3GAT3O94766 335 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 SPRP35270 261 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-201ENST00000347662 IL5RAQ01344 420 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 CHRNB3Q05901 458 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 MAPK11Q15759 364 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 FGD3Q5JSP0 725 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 RMND5BQ96G75 393 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-201ENST00000347662 NCOA3Q9Y6Q9 1424 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 ESYT3A0FGR9 886 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 CHP2O43745 196 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 MGRN1O60291 552 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 TAL1P17542 331 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-201ENST00000347662 GRB14Q14449 540 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 FAM83EQ2M2I3 478 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 EFL1Q7Z2Z2 1120 aaKnown RBP12.12□□□□□ -0.47
TRAF3-201ENST00000347662 PJA1Q8NG27 643 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 FAM50BQ9Y247 325 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 SF3B1O75533 1304 aaKnown RBP eCLIP12.12□□□□□ -0.471e-10■■■■■ 241.2
TRAF3-201ENST00000347662 RAG1P15918 1043 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 GJA1P17302 382 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 UBA1P22314 1058 aaKnown RBP12.12□□□□□ -0.47
TRAF3-201ENST00000347662 CBX5P45973 191 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 SLC11A2P49281 568 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 STX5Q13190 355 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 PTK7Q13308 1070 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 NCOA4Q13772 614 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 SPATA21Q7Z572 469 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 TARS2Q9BW92 718 aaKnown RBP12.12□□□□□ -0.47
TRAF3-201ENST00000347662 CYP26A1O43174 497 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 VTNP04004 478 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 DNAJB2P25686 324 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 RBP5P82980 135 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 TSNQ15631 228 aaKnown RBP12.11□□□□□ -0.47
TRAF3-201ENST00000347662 RASSF6Q6ZTQ3 369 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 C3orf67Q6ZVT6 689 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 FAM228AQ86W67 206 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 COLGALT2Q8IYK4 626 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 RANBP17Q9H2T7 1088 aaKnown RBP12.11□□□□□ -0.47
TRAF3-201ENST00000347662 TRIM64BA6NI03 449 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 SLC25A12O75746 678 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 IFNA14P01570 189 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 PDGFRAP16234 1089 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAF3-201ENST00000347662 CAMK1DQ8IU85 385 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 FAM172AQ8WUF8 416 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 OSBPL9Q96SU4 736 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 TRIM51Q9BSJ1 452 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 AGLP35573 1532 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 WNT10BO00744 389 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 ZC3H11AO75152 810 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAF3-201ENST00000347662 SCP2P22307 547 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 MAPK1P28482 360 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 GCLCP48506 637 aaPredicted RBP12.11□□□□□ -0.47
TRAF3-201ENST00000347662 CDC42EP1Q00587 391 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 OTUD4Q01804 1114 aaKnown RBP12.11□□□□□ -0.47
TRAF3-201ENST00000347662 TERF2Q15554 542 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 LONRF1Q17RB8 773 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 C4orf33Q8N1A6 199 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 MTA3Q9BTC8 594 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 DSN1Q9H410 356 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 CYP2C8P10632 490 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 LSP1P33241 339 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 CHI3L2Q15782 390 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 VSTM4Q8IW00 320 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 HASPINQ8TF76 798 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 KLC4Q9NSK0 619 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 CHORDC1Q9UHD1 332 aaPredicted RBP12.11□□□□□ -0.47
TRAF3-201ENST00000347662 PITPNM2Q9BZ72 1349 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 CSDE1O75534 798 aaKnown RBP12.11□□□□□ -0.47
TRAF3-201ENST00000347662 SUPT7LO94864 414 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 IFNA16P05015 189 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 PSMB9P28065 219 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 CPA2P48052 419 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 AP1S1P61966 158 aa12.11□□□□□ -0.47
TRAF3-201ENST00000347662 VAC14Q08AM6 782 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms