RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 APBA1Q02410 837 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 KDSRQ06136 332 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 C2orf27AQ580R0 203 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 NUGGCQ68CJ6 796 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 Q6ZNB5 142 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 SYT13Q7L8C5 426 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 LONP2Q86WA8 852 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 DENND1CQ8IV53 801 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 SCUBE3Q8IX30 993 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 SERPINB11Q96P15 392 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 SPAG5Q96R06 1193 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 DDX50Q9BQ39 737 aaKnown RBP16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 SLC4A5Q9BY07 1137 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 STK33Q9BYT3 514 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 LHX5Q9H2C1 402 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 MARK1Q9P0L2 795 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 SFMBT1Q9UHJ3 866 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 PCDHGC3Q9UN70 934 aa16.47■□□□□ 0.23
TSPAN4-201ENST00000346501 PRR23AA6NEV1 266 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 TULP3O75386 442 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 ALDH1A2O94788 518 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 LATS1O95835 1130 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 SLC6A11P48066 632 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 DGKGP49619 791 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 COPB1P53618 953 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 PDCLQ13371 301 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 TRIP4Q15650 581 aaPredicted RBP16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 ANO6Q4KMQ2 910 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 FILIP1LQ4L180 1135 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 EFHC1Q5JVL4 640 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 EOGTQ5NDL2 527 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 NAIF1Q69YI7 327 aaPredicted RBP16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 HEATR6Q6AI08 1181 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 SDE2Q6IQ49 451 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 MSANTD2Q6P1R3 559 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 TOGARAM2Q6ZUX3 1019 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 TMEM110Q86TL2 294 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 FAM71AQ8IYT1 594 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 CPXM2Q8N436 756 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 AOPEPQ8N6M6 819 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 TMEM35BQ8NCS4 154 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 NEK11Q8NG66 645 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 KCNV2Q8TDN2 545 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 WBP2Q969T9 261 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 PPP1R13BQ96KQ4 1090 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 POPDC2Q9HBU9 364 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 LIMA1Q9UHB6 759 aaKnown RBP16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 FHOD1Q9Y613 1164 aa16.46■□□□□ 0.23
TSPAN4-201ENST00000346501 CCDC163A0A0D9SF12 145 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 TYW5A2RUC4 315 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 E5RJQ4 531 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 CACNG3O60359 315 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 GREM1O60565 184 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 APBB3O95704 486 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 RPL34P49207 117 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 TBX4P57082 545 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 YWHAZP63104 245 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 UBXN1Q04323 297 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 KCNMA1Q12791 1236 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 DMC1Q14565 340 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 KLHL40Q2TBA0 621 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 C10orf76Q5T2E6 689 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 CEP68Q76N32 757 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 BEND5Q7L4P6 421 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 BHLHA9Q7RTU4 235 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 PASD1Q8IV76 773 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 CCDC117Q8IWD4 279 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 ETFBKMTQ8IXQ9 262 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 TERB1Q8NA31 727 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 TSTD1Q8NFU3 115 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 USP33Q8TEY7 942 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 DDI1Q8WTU0 396 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 UCMAQ8WVF2 138 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 NELL1Q92832 810 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 BHMTQ93088 406 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 BPIFA3Q9BQP9 254 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 ACP6Q9NPH0 428 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 FAM207AQ9NSI2 230 aaPredicted RBP16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 NCDNQ9UBB6 729 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 SLC12A6Q9UHW9 1150 aa16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 AGO1Q9UL18 857 aaKnown RBP16.45■□□□□ 0.22
TSPAN4-201ENST00000346501 A0A0A0MRY4 1105 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 LGALS16A8MUM7 142 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 K7EQS6 105 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 K7ESF4 209 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 APOEP02649 317 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 GLI1P08151 1106 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 GBP1P32455 592 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 CLCN1P35523 988 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 TIE1P35590 1138 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 FNTBP49356 437 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 ZNF165P49910 485 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 DGKEP52429 567 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 POLR2FP61218 127 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 RING1Q06587 406 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 NNTQ13423 1086 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 SYCP1Q15431 976 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 SKOR2Q2VWA4 1001 aaPredicted RBP16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 GAB4Q2WGN9 574 aa16.44■□□□□ 0.22
TSPAN4-201ENST00000346501 MPPE1Q53F39 396 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms