RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 SUMF1Q8NBK3 374 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 CPLX3Q8WVH0 158 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 EDEM1Q92611 657 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 CD101Q93033 1021 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 NUP58Q9BVL2 599 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 FAM170AA1A519 330 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 PES1O00541 588 aaKnown RBP16.85■□□□□ 0.29
RAB5C-201ENST00000346213 NCAM2O15394 837 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 NFATC1O95644 943 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 FYNP06241 537 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 LCP1P13796 627 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 GPD2P43304 727 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 DAOAP59103 153 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 EFEMP1Q12805 493 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 ARHGAP44Q17R89 818 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 ZNF528Q3MIS6 628 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 EMC10Q5UCC4 262 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 HTR3DQ70Z44 454 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 WDTC1Q8N5D0 677 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 NAT16Q8N8M0 369 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 KCTD13Q8WZ19 329 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 SHC3Q92529 594 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 IQCDQ96DY2 449 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 NDST4Q9H3R1 872 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 CLIC5Q9NZA1 410 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 APEX2Q9UBZ4 518 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 RASAL2Q9UJF2 1139 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 MYOFQ9NZM1 2061 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 CHURC1-FNTBB4DL54 471 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 EPHB6O15197 1021 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 MSI1O43347 362 aaKnown RBP16.84■□□□□ 0.29
RAB5C-201ENST00000346213 HMBSP08397 361 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 KRT5P13647 590 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 ATP5C1P36542 298 aaKnown RBP16.84■□□□□ 0.29
RAB5C-201ENST00000346213 FNTBP49356 437 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 TERF1P54274 439 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 SEC13P55735 322 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 YWHAEP62258 255 aaKnown RBP16.84■□□□□ 0.29
RAB5C-201ENST00000346213 KDSRQ06136 332 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 LRRC32Q14392 662 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 EXOC3L4Q17RC7 722 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 FIGNQ5HY92 759 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 DGKKQ5KSL6 1271 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 KLHDC10Q6PID8 442 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 NYAP1Q6ZVC0 841 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 FHOD1Q9Y613 1164 aa16.84■□□□□ 0.29
RAB5C-201ENST00000346213 SETSIPP0DME0 302 aa16.83■□□□□ 0.28
RAB5C-201ENST00000346213 ADH5P11766 374 aa16.83■□□□□ 0.28
RAB5C-201ENST00000346213 RPL34P49207 117 aaKnown RBP16.83■□□□□ 0.28
RAB5C-201ENST00000346213 GBP6Q6ZN66 633 aa16.83■□□□□ 0.28
RAB5C-201ENST00000346213 RPLP0P6Q8NHW5 317 aa16.83■□□□□ 0.28
RAB5C-201ENST00000346213 ABHD10Q9NUJ1 306 aa16.83■□□□□ 0.28
RAB5C-201ENST00000346213 TRMT1Q9NXH9 659 aaKnown RBP16.83■□□□□ 0.28
RAB5C-201ENST00000346213 SFMBT1Q9UHJ3 866 aa16.83■□□□□ 0.28
RAB5C-201ENST00000346213 DNMT3LQ9UJW3 386 aa16.83■□□□□ 0.28
RAB5C-201ENST00000346213 CLEC4EQ9ULY5 219 aa16.83■□□□□ 0.28
RAB5C-201ENST00000346213 CAPN11Q9UMQ6 739 aa16.83■□□□□ 0.28
RAB5C-201ENST00000346213 SH3BP1Q9Y3L3 701 aa16.83■□□□□ 0.28
RAB5C-201ENST00000346213 DNAH14Q0VDD8 3507 aa16.83■□□□□ 0.28
RAB5C-201ENST00000346213 GVINP1Q7Z2Y8 2422 aa16.83■□□□□ 0.28
RAB5C-201ENST00000346213 GTPBP10A4D1E9 387 aaKnown RBP16.82■□□□□ 0.28
RAB5C-201ENST00000346213 PAPSS2O95340 614 aaPredicted RBP16.82■□□□□ 0.28
RAB5C-201ENST00000346213 TNNT1P13805 278 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 KRT9P35527 623 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 CXCL12P48061 93 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 PITX1P78337 314 aaPredicted RBP16.82■□□□□ 0.28
RAB5C-201ENST00000346213 GRSF1Q12849 480 aaKnown RBP eCLIP16.82■□□□□ 0.28
RAB5C-201ENST00000346213 SYCP1Q15431 976 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 HEATR6Q6AI08 1181 aaKnown RBP16.82■□□□□ 0.28
RAB5C-201ENST00000346213 C1orf228Q6PIY5 440 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 TOGARAM2Q6ZUX3 1019 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 DDX42Q86XP3 938 aaKnown RBP eCLIP16.82■□□□□ 0.28
RAB5C-201ENST00000346213 ZNF276Q8N554 614 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 DCLK2Q8N568 766 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 KIAA1958Q8N8K9 716 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 BHMTQ93088 406 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 PPP1R13BQ96KQ4 1090 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 C16orf45Q96MC5 204 aaPredicted RBP16.82■□□□□ 0.28
RAB5C-201ENST00000346213 TTYH3Q9C0H2 523 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 NACA2Q9H009 215 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 SPHK2Q9NRA0 654 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 HESX1Q9UBX0 185 aa16.82■□□□□ 0.28
RAB5C-201ENST00000346213 KIF2AO00139 706 aaPredicted RBP16.81■□□□□ 0.28
RAB5C-201ENST00000346213 FOXN3O00409 490 aaPredicted RBP16.81■□□□□ 0.28
RAB5C-201ENST00000346213 HOXC11O43248 304 aaPredicted RBP16.81■□□□□ 0.28
RAB5C-201ENST00000346213 ZSCAN12O43309 604 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 HRO43593 1189 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 CCR3P51677 355 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 CETN1Q12798 172 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 BSPRYQ5W0U4 402 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 TPGS1Q6ZTW0 290 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 TMTC1Q8IUR5 882 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 USP33Q8TEY7 942 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 ZNF606Q8WXB4 792 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 NKD2Q969F2 451 aaPredicted RBP16.81■□□□□ 0.28
RAB5C-201ENST00000346213 MYEOVQ96EZ4 313 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 HHIPQ96QV1 700 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 IRF2BPLQ9H1B7 796 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 PLCB1Q9NQ66 1216 aa16.81■□□□□ 0.28
RAB5C-201ENST00000346213 ZSCAN32Q9NX65 697 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms