RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 YWHAZP63104 245 aaKnown RBP13.32□□□□□ -0.28
CLK3-201ENST00000345005 KRT17Q04695 432 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 PTK6Q13882 451 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 PDK2Q15119 407 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 SCYL2Q6P3W7 929 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 BBS12Q6ZW61 710 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 ABHD8Q96I13 439 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 TOX2Q96NM4 488 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 PEBP4Q96S96 227 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 SMOQ99835 787 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 PRMT1Q99873 361 aaKnown RBP13.32□□□□□ -0.28
CLK3-201ENST00000345005 CCDC77Q9BR77 488 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 C11orf84Q9BUA3 381 aaPredicted RBP13.32□□□□□ -0.28
CLK3-201ENST00000345005 MAK16Q9BXY0 300 aaKnown RBP13.32□□□□□ -0.28
CLK3-201ENST00000345005 ADAM7Q9H2U9 754 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.32□□□□□ -0.28
CLK3-201ENST00000345005 ARL2BPQ9Y2Y0 163 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 KLHL33A6NCF5 533 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 SHBGP04278 402 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 ITGB1P05556 798 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 NQO1P15559 274 aaKnown RBP13.32□□□□□ -0.28
CLK3-201ENST00000345005 OR1G1P47890 313 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 TKTL1P51854 596 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 ATN1P54259 1190 aaPredicted RBP13.32□□□□□ -0.28
CLK3-201ENST00000345005 CDH6P55285 790 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 YWHAHQ04917 246 aaPredicted RBP13.32□□□□□ -0.28
CLK3-201ENST00000345005 ADCY1Q08828 1119 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 CCDC15Q0P6D6 951 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 RAB41Q5JT25 222 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 CYP4V2Q6ZWL3 525 aaPredicted RBP13.32□□□□□ -0.28
CLK3-201ENST00000345005 ZNF365Q70YC5 407 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 STRADAQ7RTN6 431 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 VSIG1Q86XK7 387 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 MYLPFQ96A32 169 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 FAM149B1Q96BN6 582 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 RAB3IPQ96QF0 476 aaPredicted RBP13.32□□□□□ -0.28
CLK3-201ENST00000345005 CALN1Q9BXU9 219 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 FOXP3Q9BZS1 431 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 MCOLN1Q9GZU1 580 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 CRISPLD2Q9H0B8 497 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 HIPK3Q9H422 1215 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 CSNK1G1Q9HCP0 422 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 CNGB3Q9NQW8 809 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 ACTL7BQ9Y614 415 aa13.32□□□□□ -0.28
CLK3-201ENST00000345005 ANKRD33BA6NCL7 494 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 MDM4O15151 490 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 CST8O60676 142 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 DAB1O75553 588 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 OAS1P00973 400 aaKnown RBP13.31□□□□□ -0.28
CLK3-201ENST00000345005 CXCL10P02778 98 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 NOS2P35228 1153 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 ARSEP51690 589 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 HDAC4P56524 1084 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 AUHQ13825 339 aaKnown RBP13.31□□□□□ -0.28
CLK3-201ENST00000345005 TFDP2Q14188 446 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 KRT81Q14533 505 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 SLC25A52Q3SY17 297 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 GALNTL6Q49A17 601 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 PPP1R21Q6ZMI0 780 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 RFX6Q8HWS3 928 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 DEFB106AQ8N104 65 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 PKMYT1Q99640 499 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLK3-201ENST00000345005 ASIC3Q9UHC3 531 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 ZNF148Q9UQR1 794 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 VWA8A3KMH1 1905 aa13.31□□□□□ -0.28
CLK3-201ENST00000345005 ZNF487B1APH4 448 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 LIN7AO14910 233 aaPredicted RBP13.3□□□□□ -0.28
CLK3-201ENST00000345005 B4GALT3O60512 393 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 TADA2AO75478 443 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 WFS1O76024 890 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 ITGAVP06756 1048 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 CD48P09326 243 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 NDUFV1P49821 464 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 VCPP55072 806 aaKnown RBP13.3□□□□□ -0.28
CLK3-201ENST00000345005 NR1H3Q13133 447 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 RAB6CQ53S08 254 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 C1orf53Q5VUE5 145 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 C4orf50Q6ZRC1 276 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 ARHGEF18Q6ZSZ5 1173 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 GSTA5Q7RTV2 222 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 CCDC89Q8N998 374 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 ZMIZ2Q8NF64 920 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 NKD2Q969F2 451 aaPredicted RBP13.3□□□□□ -0.28
CLK3-201ENST00000345005 SNF8Q96H20 258 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 CASD1Q96PB1 797 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 KCNK16Q96T55 309 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 COLEC11Q9BWP8 271 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 RAB6CQ9H0N0 254 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 SEMA4AQ9H3S1 761 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 POPDC2Q9HBU9 364 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 DNPEPQ9ULA0 475 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 STAP1Q9ULZ2 295 aa13.3□□□□□ -0.28
CLK3-201ENST00000345005 F8W810 466 aa13.29□□□□□ -0.28
CLK3-201ENST00000345005 SYN3O14994 580 aa13.29□□□□□ -0.28
CLK3-201ENST00000345005 OAZ2O95190 189 aa13.29□□□□□ -0.28
CLK3-201ENST00000345005 LUC7L3O95232 432 aaKnown RBP13.29□□□□□ -0.28
CLK3-201ENST00000345005 ALDH2P05091 517 aa13.29□□□□□ -0.28
CLK3-201ENST00000345005 BDNFP23560 247 aa13.29□□□□□ -0.28
CLK3-201ENST00000345005 MNX1P50219 401 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms