RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 LGMNQ99538 433 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 NTPCRQ9BSD7 190 aaKnown RBP13.47□□□□□ -0.25
TCF3-202ENST00000344749 LRRC40Q9H9A6 602 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 TELO2Q9Y4R8 837 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 PRRC2BQ5JSZ5 2229 aaKnown RBP13.47□□□□□ -0.25
TCF3-202ENST00000344749 ANP32DO95626 131 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 SCNN1GP51170 649 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 TWF1Q12792 350 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 RASA2Q15283 850 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 RCN1Q15293 331 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 FUKQ8N0W3 1084 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 TRIM4Q9C037 500 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 RRAGCQ9HB90 399 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 BAG5Q9UL15 447 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 ZBBXA8MT70 800 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 E9PBE3 544 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 GPR182O15218 404 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 NVLO15381 856 aaKnown RBP13.47□□□□□ -0.25
TCF3-202ENST00000344749 KLHL41O60662 606 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 ARHGEF6Q15052 776 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 N4BP2L1Q5TBK1 243 aaPredicted RBP13.47□□□□□ -0.25
TCF3-202ENST00000344749 ATXN2LQ8WWM7 1075 aaKnown RBP13.47□□□□□ -0.25
TCF3-202ENST00000344749 PIK3R5Q8WYR1 880 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 LENG1Q96BZ8 264 aaPredicted RBP13.47□□□□□ -0.25
TCF3-202ENST00000344749 ELOVL4Q9GZR5 314 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 TUBGCP4Q9UGJ1 667 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 TAF1P21675 1872 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 CNTNAP1P78357 1384 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 MTSS1O43312 755 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 MPP3Q13368 585 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 TMEM259Q4ZIN3 620 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 OVOS1Q6IE37 1185 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 SLC39A4Q6P5W5 647 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 C4orf22Q6V702 233 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 ZNF410Q86VK4 478 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 POU5F2Q8N7G0 328 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 LRRC4CQ9HCJ2 640 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 RBM22Q9NW64 420 aaKnown RBP eCLIP13.47□□□□□ -0.253e-6■■■■■ 30.2
TCF3-202ENST00000344749 VANGL2Q9ULK5 521 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 PPME1Q9Y570 386 aa13.47□□□□□ -0.25
TCF3-202ENST00000344749 GLRA3O75311 464 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 VNN1O95497 513 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 GOT1P17174 413 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 NRLP54845 237 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 TRIP10Q15642 601 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 SPOCK2Q92563 424 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 ASIC4Q96FT7 647 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 IL1RL2Q9HB29 575 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 COQ4Q9Y3A0 265 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 SNCAIPQ9Y6H5 919 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 SPTLC1O15269 473 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 F9P00740 461 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 SMIM10L2AP0DMW4 78 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 SMIM10L2BP0DMW5 78 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 ERVK-10P10266 1014 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 TCF4P15884 667 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 KCNJ2P63252 427 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 FSCN1Q16658 493 aaKnown RBP13.46□□□□□ -0.25
TCF3-202ENST00000344749 GPR142Q7Z601 462 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 DCP1BQ8IZD4 617 aaKnown RBP13.46□□□□□ -0.25
TCF3-202ENST00000344749 SDCCAG3Q96C92 435 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 FICDQ9BVA6 458 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 MYLK2Q9H1R3 596 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 ETNK2Q9NVF9 386 aa13.46□□□□□ -0.25
TCF3-202ENST00000344749 KIF3CO14782 793 aa13.46□□□□□ -0.26
TCF3-202ENST00000344749 RALBP11234 206 aa13.46□□□□□ -0.26
TCF3-202ENST00000344749 YBX3P16989 372 aaKnown RBP eCLIP13.46□□□□□ -0.264e-8■□□□□ 11.1
TCF3-202ENST00000344749 SERPINB5P36952 375 aa13.46□□□□□ -0.26
TCF3-202ENST00000344749 PEX5P50542 639 aa13.46□□□□□ -0.26
TCF3-202ENST00000344749 ZNF280AP59817 542 aaPredicted RBP13.46□□□□□ -0.26
TCF3-202ENST00000344749 PDAP1Q13442 181 aaKnown RBP13.46□□□□□ -0.26
TCF3-202ENST00000344749 EML3Q32P44 896 aa13.46□□□□□ -0.26
TCF3-202ENST00000344749 LRRC8EQ6NSJ5 796 aa13.46□□□□□ -0.26
TCF3-202ENST00000344749 TSPYL2Q9H2G4 693 aaPredicted RBP13.46□□□□□ -0.26
TCF3-202ENST00000344749 PRDM12Q9H4Q4 367 aa13.46□□□□□ -0.26
TCF3-202ENST00000344749 GRHL1Q9NZI5 618 aa13.46□□□□□ -0.26
TCF3-202ENST00000344749 DRG1Q9Y295 367 aaKnown RBP13.46□□□□□ -0.26
TCF3-202ENST00000344749 STXBP5LQ9Y2K9 1186 aa13.46□□□□□ -0.26
TCF3-202ENST00000344749 TSPAN3O60637 253 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 EEF1B2P24534 225 aaKnown RBP13.45□□□□□ -0.26
TCF3-202ENST00000344749 PSMB4P28070 264 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 PTGIRP43119 386 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 MMP13P45452 471 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 ANKRD20A4Q4UJ75 823 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 ANKRD20A2Q5SQ80 823 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 ANKRD20A1Q5TYW2 823 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 IQSEC1Q6DN90 963 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 ULK4Q96C45 1275 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 NIFKQ9BYG3 293 aaKnown RBP13.45□□□□□ -0.26
TCF3-202ENST00000344749 NT5MQ9NPB1 228 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 ZC3H4Q9UPT8 1303 aaKnown RBP13.45□□□□□ -0.26
TCF3-202ENST00000344749 RNF103-CHMP3A0A140T963 221 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 PTPN1P18031 435 aaKnown RBP13.45□□□□□ -0.26
TCF3-202ENST00000344749 HOXD10P28358 340 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 LHX1P48742 406 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 MGAT5Q09328 741 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 DNAL1Q4LDG9 190 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 TXNRD3NBQ6F5E7 133 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 FBXO32Q969P5 355 aa13.45□□□□□ -0.26
TCF3-202ENST00000344749 ZFP42Q96MM3 310 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms