RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 TMPRSS4Q9NRS4 437 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 MYO18AQ92614 2054 aaKnown RBP22.18■■□□□ 1.14
CCDC38-201ENST00000344280 A0A0G2JND7 137 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 KPNA7A9QM74 516 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 CSH1P0DML2 217 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 CSH2P0DML3 217 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 GOT1P17174 413 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 MAGEA3P43357 314 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 BCAT1P54687 386 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 CBLBQ13191 982 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 TTC39BQ5VTQ0 682 aaPredicted RBP22.18■■□□□ 1.14
CCDC38-201ENST00000344280 DNAJB3Q8WWF6 145 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 SIGLEC10Q96LC7 697 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 SRPK1Q96SB4 655 aaKnown RBP22.18■■□□□ 1.14
CCDC38-201ENST00000344280 TSSK1BQ9BXA7 367 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 SLC5A4Q9NY91 659 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 DTLQ9NZJ0 730 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 MORF4L1Q9UBU8 362 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 PIN4Q9Y237 131 aaKnown RBP22.18■■□□□ 1.14
CCDC38-201ENST00000344280 MAD1L1Q9Y6D9 718 aa22.18■■□□□ 1.14
CCDC38-201ENST00000344280 CYP2C9P11712 490 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 IGFBP6P24592 240 aaPredicted RBP22.17■■□□□ 1.14
CCDC38-201ENST00000344280 PRKCHP24723 683 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 PITX1P78337 314 aaPredicted RBP22.17■■□□□ 1.14
CCDC38-201ENST00000344280 CTC1Q2NKJ3 1217 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 NCBP2-AS2Q69YL0 99 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 FAM131BQ86XD5 332 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 CDKL3Q8IVW4 592 aaPredicted RBP22.17■■□□□ 1.14
CCDC38-201ENST00000344280 VPS52Q8N1B4 723 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 CRYBG2Q8N1P7 616 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 KCNK13Q9HB14 408 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 ZFP69BQ9UJL9 534 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 UBQLN1Q9UMX0 589 aaKnown RBP22.17■■□□□ 1.14
CCDC38-201ENST00000344280 C2orf71A6NGG8 1288 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 GCATO75600 419 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 APOEP02649 317 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 EZRP15311 586 aaKnown RBP22.17■■□□□ 1.14
CCDC38-201ENST00000344280 VAV1P15498 845 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 CCDC91Q7Z6B0 441 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 MECRQ9BV79 373 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 MCM8Q9UJA3 840 aa22.17■■□□□ 1.14
CCDC38-201ENST00000344280 RRN3P2A6NIE6 340 aa22.16■■□□□ 1.14
CCDC38-201ENST00000344280 TROVE2P10155 538 aaKnown RBP eCLIP22.16■■□□□ 1.14
CCDC38-201ENST00000344280 RPL34P49207 117 aaKnown RBP22.16■■□□□ 1.14
CCDC38-201ENST00000344280 MRPS5P82675 430 aaKnown RBP22.16■■□□□ 1.14
CCDC38-201ENST00000344280 PRKD1Q15139 912 aaPredicted RBP22.16■■□□□ 1.14
CCDC38-201ENST00000344280 CLNKQ7Z7G1 428 aa22.16■■□□□ 1.14
CCDC38-201ENST00000344280 CHSY1Q86X52 802 aa22.16■■□□□ 1.14
CCDC38-201ENST00000344280 PRR11Q96HE9 360 aaPredicted RBP22.16■■□□□ 1.14
CCDC38-201ENST00000344280 LGMNQ99538 433 aa22.16■■□□□ 1.14
CCDC38-201ENST00000344280 USP3Q9Y6I4 520 aa22.16■■□□□ 1.14
CCDC38-201ENST00000344280 HMX2A2RU54 273 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 RFPL1O75677 317 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 DESP17661 470 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 SERPINB4P48594 390 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 UNC5BQ8IZJ1 945 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 MCUQ8NE86 351 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 QKIQ96PU8 341 aaKnown RBP eCLIP22.15■■□□□ 1.14
CCDC38-201ENST00000344280 FRMD8Q9BZ67 464 aaPredicted RBP22.15■■□□□ 1.14
CCDC38-201ENST00000344280 PIH1D1Q9NWS0 290 aaKnown RBP22.15■■□□□ 1.14
CCDC38-201ENST00000344280 CEP350Q5VT06 3117 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 TRIP12Q14669 1992 aaPredicted RBP22.15■■□□□ 1.14
CCDC38-201ENST00000344280 ZNF487B1APH4 448 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 COPEO14579 308 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 SNX16P57768 344 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 IQSEC1Q6DN90 963 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 DENND5BQ6ZUT9 1274 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 ARRDC4Q8NCT1 418 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 TBC1D10AQ9BXI6 508 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 SLC13A1Q9BZW2 595 aa22.15■■□□□ 1.14
CCDC38-201ENST00000344280 NRCAMQ92823 1304 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 CLDN5O00501 218 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 ATP5HO75947 161 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 BEST1O76090 585 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 TOP3BO95985 862 aaKnown RBP22.14■■□□□ 1.14
CCDC38-201ENST00000344280 F2P00734 622 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 SNRPAP09012 282 aaKnown RBP22.14■■□□□ 1.14
CCDC38-201ENST00000344280 NEFHP12036 1026 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 CES4AQ5XG92 561 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 OSTM1Q86WC4 334 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 DEFB106AQ8N104 65 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 EBNA1BP2Q99848 306 aaKnown RBP22.14■■□□□ 1.14
CCDC38-201ENST00000344280 TRIM55Q9BYV6 548 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 SNX25Q9H3E2 840 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 EBF2Q9HAK2 575 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 FBXO6Q9NRD1 293 aaPredicted RBP22.14■■□□□ 1.14
CCDC38-201ENST00000344280 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.14■■□□□ 1.14
CCDC38-201ENST00000344280 ZNF180Q9UJW8 692 aa22.14■■□□□ 1.14
CCDC38-201ENST00000344280 SYNJ2BP-COX16A0A087WUM0 186 aa22.14■■□□□ 1.13
CCDC38-201ENST00000344280 MBLAC1A4D2B0 266 aaPredicted RBP22.14■■□□□ 1.13
CCDC38-201ENST00000344280 CYB561D2O14569 222 aa22.14■■□□□ 1.13
CCDC38-201ENST00000344280 TRDMT1O14717 391 aaKnown RBP22.14■■□□□ 1.13
CCDC38-201ENST00000344280 KRT37O76014 449 aa22.14■■□□□ 1.13
CCDC38-201ENST00000344280 ANP32DO95626 131 aa22.14■■□□□ 1.13
CCDC38-201ENST00000344280 EPHB2P29323 1055 aa22.14■■□□□ 1.13
CCDC38-201ENST00000344280 CRADDP78560 199 aa22.14■■□□□ 1.13
CCDC38-201ENST00000344280 SNX17Q15036 470 aa22.14■■□□□ 1.13
CCDC38-201ENST00000344280 UBXN11Q5T124 520 aa22.14■■□□□ 1.13
CCDC38-201ENST00000344280 OTUD1Q5VV17 481 aaPredicted RBP22.14■■□□□ 1.13
CCDC38-201ENST00000344280 APBB1IPQ7Z5R6 666 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms