RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 WDR6Q9NNW5 1121 aaKnown RBP8.48□□□□□ -1.05
HMGCR-202ENST00000343975 CYP1A2P05177 515 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 POU2F2P09086 479 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 GJA1P17302 382 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 PTPN9P43378 593 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 TUBP50607 506 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 CDH6P55285 790 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 PTCRAQ6ISU1 281 aaPredicted RBP8.48□□□□□ -1.05
HMGCR-202ENST00000343975 BEND5Q7L4P6 421 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 RFX6Q8HWS3 928 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 MNS1Q8NEH6 495 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 CCDC26Q8TAB7 109 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 ZSCAN18Q8TBC5 510 aaPredicted RBP8.48□□□□□ -1.05
HMGCR-202ENST00000343975 ADAM32Q8TC27 787 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 DDI1Q8WTU0 396 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 MYRFLQ96LU7 910 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 DNAI1Q9UI46 699 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 FBXL21Q9UKT6 434 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 HPCAL4Q9UM19 191 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 NAALADL1Q9UQQ1 740 aa8.48□□□□□ -1.05
HMGCR-202ENST00000343975 ZNF263O14978 683 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 ADH1CP00326 375 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 ZFXP17010 805 aaPredicted RBP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 AIF1P55008 147 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 CDH18Q13634 790 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 ANO4Q32M45 955 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 CPA6Q8N4T0 437 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 BPIFB1Q8TDL5 484 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 UCMAQ8WVF2 138 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 SMARCD2Q92925 531 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 DDX23Q9BUQ8 820 aaKnown RBP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 PACSIN1Q9BY11 444 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 EPOPA6NHQ4 379 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 SRGAP2O75044 1071 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 ETFBP38117 255 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 GABRB2P47870 512 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 NTHL1P78549 312 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 ZNF177Q13360 481 aaPredicted RBP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 ZC3H12AQ5D1E8 599 aaKnown RBP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 PM20D1Q6GTS8 502 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 SH3RF2Q8TEC5 729 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 DEPDC1BQ8WUY9 529 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 TMA16Q96EY4 203 aaKnown RBP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 BTN2A3PQ96KV6 586 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 CFAP57Q96MR6 1250 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 PRO3102Q9H379 93 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 DNMT3BQ9UBC3 853 aaKnown RBP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 SFMBT1Q9UHJ3 866 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 JRKLQ9Y4A0 524 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 PALMO75781 387 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 URI1O94763 535 aaPredicted RBP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 CFHP08603 1231 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 CKAP4Q07065 602 aaKnown RBP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 PKDCCQ504Y2 493 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 OLFML1Q6UWY5 402 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 ARID3BQ8IVW6 561 aaPredicted RBP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 CMTM8Q8IZV2 173 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 NDRG1Q92597 394 aaKnown RBP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 TKTL2Q9H0I9 626 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 SMOC2Q9H3U7 446 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 HCFC1R1Q9NWW0 138 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 MTMR10Q9NXD2 777 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 USP18Q9UMW8 372 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 AP4E1Q9UPM8 1137 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 USP15Q9Y4E8 981 aaPredicted RBP8.47□□□□□ -1.05
HMGCR-202ENST00000343975 HYOU1Q9Y4L1 999 aa8.47□□□□□ -1.05
HMGCR-202ENST00000343975 ALPK3Q96L96 1907 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 TMEM191CA6NGB0 347 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 EEF2KO00418 725 aaKnown RBP8.46□□□□□ -1.05
HMGCR-202ENST00000343975 KCNK3O14649 394 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 CEP104O60308 925 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 TCP1P17987 556 aaKnown RBP8.46□□□□□ -1.05
HMGCR-202ENST00000343975 CORO1AP31146 461 aaKnown RBP8.46□□□□□ -1.05
HMGCR-202ENST00000343975 GTF2F1P35269 517 aaKnown RBP eCLIP8.46□□□□□ -1.051e-11■■■■■ 35.1
HMGCR-202ENST00000343975 FLT3P36888 993 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 PFKPQ01813 784 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 NNTQ13423 1086 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 PDGFRLQ15198 375 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 KLHDC10Q6PID8 442 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 GPRIN1Q7Z2K8 1008 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 NXPE3Q969Y0 559 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 OTUB2Q96DC9 234 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 PKMYT1Q99640 499 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 ZSWIM1Q9BR11 485 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 TRMT61BQ9BVS5 477 aaKnown RBP8.46□□□□□ -1.05
HMGCR-202ENST00000343975 CCSER2Q9H7U1 834 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 ALG6Q9Y672 507 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 USP3Q9Y6I4 520 aa8.46□□□□□ -1.05
HMGCR-202ENST00000343975 FNDC1Q4ZHG4 1894 aaPredicted RBP8.46□□□□□ -1.06
HMGCR-202ENST00000343975 MYH10P35580 1976 aa8.46□□□□□ -1.06
HMGCR-202ENST00000343975 LTBP2Q14767 1821 aa8.46□□□□□ -1.06
HMGCR-202ENST00000343975 H0Y626 953 aa8.46□□□□□ -1.06
HMGCR-202ENST00000343975 MDM4O15151 490 aa8.46□□□□□ -1.06
HMGCR-202ENST00000343975 IRAK2O43187 625 aa8.46□□□□□ -1.06
HMGCR-202ENST00000343975 ZNF189O75820 626 aaPredicted RBP8.46□□□□□ -1.06
HMGCR-202ENST00000343975 FTCDO95954 541 aa8.46□□□□□ -1.06
HMGCR-202ENST00000343975 EPHB2P29323 1055 aa8.46□□□□□ -1.06
HMGCR-202ENST00000343975 MAN1A1P33908 653 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms