RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 LINC00301Q8NCQ3 95 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 SPATA5L1Q9BVQ7 753 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 GDF11O95390 407 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 BBS4Q96RK4 519 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 NECTIN3Q9NQS3 549 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 LOC100506127A0A0U1RQW1 187 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 CENPCQ03188 943 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 KCNB1Q14721 858 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 RPRD1AQ96P16 312 aaPredicted RBP18.09■□□□□ 0.49
SMAD4-201ENST00000342988 UNKQ9C0B0 810 aaKnown RBP18.09■□□□□ 0.49
SMAD4-201ENST00000342988 A0A087WXM4 84 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 LOC100653049A0A140TA62 436 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 TUBA3CQ13748 450 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 ZCCHC2Q9C0B9 1178 aaKnown RBP18.09■□□□□ 0.49
SMAD4-201ENST00000342988 KCNN2Q9H2S1 579 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 FLT1P17948 1338 aa18.09■□□□□ 0.49
SMAD4-201ENST00000342988 STAU1O95793 577 aaKnown RBP18.08■□□□□ 0.49
SMAD4-201ENST00000342988 MYDGFQ969H8 173 aa18.08■□□□□ 0.49
SMAD4-201ENST00000342988 KLHL32Q96NJ5 620 aa18.08■□□□□ 0.49
SMAD4-201ENST00000342988 PIGSQ96S52 555 aa18.08■□□□□ 0.49
SMAD4-201ENST00000342988 MMADHCQ9H3L0 296 aaPredicted RBP18.08■□□□□ 0.49
SMAD4-201ENST00000342988 POLR1AO95602 1720 aaPredicted RBP18.08■□□□□ 0.49
SMAD4-201ENST00000342988 TBC1D25Q3MII6 688 aa18.08■□□□□ 0.49
SMAD4-201ENST00000342988 FGD3Q5JSP0 725 aa18.08■□□□□ 0.49
SMAD4-201ENST00000342988 RAD54LQ92698 747 aa18.08■□□□□ 0.49
SMAD4-201ENST00000342988 TRIP11Q15643 1979 aa18.08■□□□□ 0.49
SMAD4-201ENST00000342988 ZCCHC18P0CG32 403 aa18.08■□□□□ 0.49
SMAD4-201ENST00000342988 CHRNDQ07001 517 aa18.08■□□□□ 0.49
SMAD4-201ENST00000342988 STOX1Q6ZVD7 989 aa18.08■□□□□ 0.49
SMAD4-201ENST00000342988 AGPAT1Q99943 283 aa18.08■□□□□ 0.49
SMAD4-201ENST00000342988 RMI1Q9H9A7 625 aa18.08■□□□□ 0.49
SMAD4-201ENST00000342988 KBTBD13C9JR72 458 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 PLOD2O00469 737 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 AP1G2O75843 785 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 CYP2A7P20853 494 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 SLC11A2P49281 568 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 IER5Q5VY09 327 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 EMSYQ7Z589 1322 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 LRG1P02750 347 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 GCP02774 474 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 ETFBP38117 255 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 TDRD10Q5VZ19 366 aaKnown RBP18.08■□□□□ 0.48
SMAD4-201ENST00000342988 PHB2Q99623 299 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 SLC16A3O15427 465 aaKnown RBP18.08■□□□□ 0.48
SMAD4-201ENST00000342988 HOXC9P31274 260 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 ALDH9A1P49189 494 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 PDGFCQ9NRA1 345 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 GGT7Q9UJ14 662 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 CACNA2D1P54289 1103 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 HUNKP57058 714 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 NECAB2Q7Z6G3 386 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 SYTL5Q8TDW5 730 aaPredicted RBP18.08■□□□□ 0.48
SMAD4-201ENST00000342988 KDM5DQ9BY66 1539 aa18.08■□□□□ 0.48
SMAD4-201ENST00000342988 MLH3Q9UHC1 1453 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 ICE1Q9Y2F5 2266 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 DSG4Q86SJ6 1040 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 TDRD5Q8NAT2 981 aaKnown RBP18.07■□□□□ 0.48
SMAD4-201ENST00000342988 AIF1LQ9BQI0 150 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 EFHC1Q5JVL4 640 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 INTS11Q5TA45 600 aaKnown RBP18.07■□□□□ 0.48
SMAD4-201ENST00000342988 KYQ8NBH2 561 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 ZNF214Q9UL59 606 aaPredicted RBP18.07■□□□□ 0.48
SMAD4-201ENST00000342988 USP19O94966 1318 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 PNMA6EA0A0J9YXQ4 647 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 IFNA6P05013 189 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 ATP6V0D2Q8N8Y2 350 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 SUPT7LO94864 414 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 RHOBTB3O94955 611 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 PRKAA2P54646 552 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 FAM171BQ6P995 826 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 BHLHB9Q6PI77 547 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 TRPV1Q8NER1 839 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 DPY30Q9C005 99 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 DBR1Q9UK59 544 aaKnown RBP18.07■□□□□ 0.48
SMAD4-201ENST00000342988 ZBTB5O15062 677 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 VPS72Q15906 364 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 GPALPP1Q8IXQ4 340 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 ACTRT2Q8TDY3 377 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 GGA3Q9NZ52 723 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 NUDT5Q9UKK9 219 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 CPSF4O95639 269 aaKnown RBP18.07■□□□□ 0.48
SMAD4-201ENST00000342988 TPBGLP0DKB5 382 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 ARFIP1P53367 373 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 DCAF6Q58WW2 860 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 SPPL2AQ8TCT8 520 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 CCDC86Q9H6F5 360 aaKnown RBP18.07■□□□□ 0.48
SMAD4-201ENST00000342988 L1RE1Q9UN81 338 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 SNX7Q9UNH6 387 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 PDE4DIPQ5VU43 2346 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 SLC16A2P36021 539 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 CEBPGP53567 150 aa18.07■□□□□ 0.48
SMAD4-201ENST00000342988 ZNHIT3Q15649 155 aaPredicted RBP18.07■□□□□ 0.48
SMAD4-201ENST00000342988 WDR12Q9GZL7 423 aaKnown RBP18.07■□□□□ 0.48
SMAD4-201ENST00000342988 JPH1Q9HDC5 661 aaPredicted RBP18.07■□□□□ 0.48
SMAD4-201ENST00000342988 FAM200BP0CF97 657 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 IRF1P10914 325 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 ATF6P18850 670 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 GPR15P49685 360 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 MTAPQ13126 283 aa18.06■□□□□ 0.48
SMAD4-201ENST00000342988 TMEM168Q9H0V1 697 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms