RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PHGDHO43175 533 aaKnown RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 SMNDC1O75940 238 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 ABHD2P08910 425 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 CYP2R1Q6VVX0 501 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 BBS12Q6ZW61 710 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 PABPC5Q96DU9 382 aaKnown RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 BORCS6Q96GS4 357 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 PRPF18Q99633 342 aaKnown RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 SEMA6AQ9H2E6 1030 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 AAASQ9NRG9 546 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 DDIT4Q9NX09 232 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 RUVBL2Q9Y230 463 aaKnown RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 TIMM13Q9Y5L4 95 aaPredicted RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 ARHGAP10A1A4S6 786 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 C3orf70A6NLC5 250 aaPredicted RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 SIGLEC16A6NMB1 481 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 SMAPO00193 183 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 TPP1O14773 563 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 ALADP13716 330 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 ACO1P21399 889 aaKnown RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 FGFR3P22607 806 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 GSTT1P30711 240 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 CDKN2BP42772 138 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 NRF1Q16656 503 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 CYP1B1Q16678 543 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 ACSBG2Q5FVE4 666 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 SNX32Q86XE0 403 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 RNF168Q8IYW5 571 aaPredicted RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 SPATA6LQ8N4H0 392 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 LMO3Q8TAP4 145 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 PIWIL2Q8TC59 973 aaKnown RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 ING2Q9H160 280 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 ASCC2Q9H1I8 757 aaPredicted RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 COPS7BQ9H9Q2 264 aaPredicted RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 PLEKHA5Q9HAU0 1116 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 ETNK2Q9NVF9 386 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 PRMT7Q9NVM4 692 aaPredicted RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 BNIP3LO60238 219 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 UGT1A9O60656 530 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 TMEM63AO94886 807 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 PLOD1Q02809 727 aaPredicted RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 PARP6Q2NL67 630 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 RNASEH2BQ5TBB1 312 aaKnown RBP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 STYK1Q6J9G0 422 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 MTHFD1LQ6UB35 978 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 ULK2Q8IYT8 1036 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 CDC26Q8NHZ8 85 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 SDCCAG3Q96C92 435 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 SERAC1Q96JX3 654 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 PIF1Q9H611 641 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 UGT1A7Q9HAW7 530 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 UGT1A10Q9HAW8 530 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 UGT1A8Q9HAW9 530 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 XPNPEP1Q9NQW7 623 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 PNPOQ9NVS9 261 aa12.81□□□□□ -0.36
SNRNP48-201ENST00000342415 ANPEPP15144 967 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 AKAP5P24588 427 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 CCNA1P78396 465 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 ANO4Q32M45 955 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 APPL2Q8NEU8 664 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 CYGBQ8WWM9 190 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 ASS1P00966 412 aaKnown RBP12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 C4BPAP04003 597 aaKnown RBP12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 SKIV2L2P42285 1042 aaKnown RBP12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 BLMHQ13867 455 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 R3HDM1Q15032 1099 aaKnown RBP12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 PDK1Q15118 436 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 XRRA1Q6P2D8 792 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 MAGEC3Q8TD91 643 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 PHF21BQ96EK2 531 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 PHACTR1Q9C0D0 580 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 TCF7L2Q9NQB0 619 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 IPO11Q9UI26 975 aaKnown RBP12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 RABGEF1Q9UJ41 708 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 DYNC1LI2O43237 492 aaPredicted RBP12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 IL18RAPO95256 599 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 NAGLUP54802 743 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 TGFB2P61812 414 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 POU6F1Q14863 301 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 MSS51Q4VC12 460 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 C12orf56Q8IXR9 622 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 TDRD5Q8NAT2 981 aaKnown RBP12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 EDEM1Q92611 657 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 THAP11Q96EK4 314 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 SNRNP25Q9BV90 132 aaKnown RBP12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 KRT82Q9NSB4 513 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 RNF181Q9P0P0 153 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 CDYLQ9Y232 598 aa12.8□□□□□ -0.36
SNRNP48-201ENST00000342415 A0A096LPK6 155 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 TBX10O75333 385 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 CTSHP09668 335 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 GFAPP14136 432 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 INSRRP14616 1297 aa12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 UBA1P22314 1058 aaKnown RBP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 KPNA2P52292 529 aaKnown RBP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 PDAP1Q13442 181 aaKnown RBP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 OASLQ15646 514 aaKnown RBP12.79□□□□□ -0.36
SNRNP48-201ENST00000342415 SPDYAQ5MJ70 313 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms