RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 SIGLEC14Q08ET2 396 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 TDGQ13569 410 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 TEAD2Q15562 447 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 WDR44Q5JSH3 913 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 TMEM150AQ86TG1 271 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 NLRP8Q86W28 1048 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 FGF14Q92915 247 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 TTLL2Q9BWV7 592 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 ZNF518BQ9C0D4 1074 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 GPR88Q9GZN0 384 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 GRPEL1Q9HAV7 217 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.85□□□□□ -0.67
TPM3-207ENST00000341372 E2F8A0AVK6 867 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 SLC38A8A6NNN8 435 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 SOBPA7XYQ1 873 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 ECI2O75521 394 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 TADA3O75528 432 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 AFPP02771 609 aaKnown RBP10.85□□□□□ -0.67
TPM3-207ENST00000341372 F11P03951 625 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 CACNA2D1P54289 1103 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 CUL2Q13617 745 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 SDHAF4Q5VUM1 108 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 PARM1Q6UWI2 310 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 LRRC69Q6ZNQ3 347 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 TRIM67Q6ZTA4 783 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 ACOT1Q86TX2 421 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 FUKQ8N0W3 1084 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 RHBDD1Q8TEB9 315 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 RSAD2Q8WXG1 361 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 JPH3Q8WXH2 748 aaPredicted RBP10.85□□□□□ -0.67
TPM3-207ENST00000341372 PMEPA1Q969W9 287 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 ASIC4Q96FT7 647 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 UXTQ9UBK9 157 aaPredicted RBP10.85□□□□□ -0.67
TPM3-207ENST00000341372 COL4A2P08572 1712 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 ATP8B3O60423 1300 aa10.85□□□□□ -0.67
TPM3-207ENST00000341372 EDN3P14138 238 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 GJA1P17302 382 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 TBXAS1P24557 533 aaPredicted RBP10.84□□□□□ -0.67
TPM3-207ENST00000341372 CETN1Q12798 172 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 TMEM214Q6NUQ4 689 aaKnown RBP10.84□□□□□ -0.67
TPM3-207ENST00000341372 SCN4BQ8IWT1 228 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 SLC44A3Q8N4M1 653 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 ENOX1Q8TC92 643 aaKnown RBP10.84□□□□□ -0.67
TPM3-207ENST00000341372 ELSPBP1Q96BH3 223 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 MCRS1Q96EZ8 462 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 SMARCD1Q96GM5 515 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 SMOC2Q9H3U7 446 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 CSNK1G1Q9HCP0 422 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 SLC2A4RGQ9NR83 387 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 CISHQ9NSE2 258 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 MYH10P35580 1976 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 ZDBF2Q9HCK1 2354 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 ZNF318Q5VUA4 2279 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 GTPBP10A4D1E9 387 aaKnown RBP10.84□□□□□ -0.67
TPM3-207ENST00000341372 F8VP50 259 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 MEN1O00255 615 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 CLDN5O00501 218 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 PLD2O14939 933 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 GPR39O43194 453 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 SRFP11831 508 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 TRIM21P19474 475 aaKnown RBP10.84□□□□□ -0.67
TPM3-207ENST00000341372 DDX6P26196 483 aaKnown RBP eCLIP10.84□□□□□ -0.67
TPM3-207ENST00000341372 GRIK1P39086 918 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 STX1AQ16623 288 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 FAM78AQ5JUQ0 283 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 DENND5BQ6ZUT9 1274 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 BMP8AQ7Z5Y6 402 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 FAM114A1Q8IWE2 563 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 SLC4A11Q8NBS3 891 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 EHBP1Q8NDI1 1231 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 STKLD1Q8NE28 680 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 SMARCD2Q92925 531 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 WNT2BQ93097 391 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 ZSWIM3Q96MP5 696 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 NT5C1BQ96P26 610 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 GCNAQ96QF7 691 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 HNRNPABQ99729 332 aaKnown RBP10.84□□□□□ -0.67
TPM3-207ENST00000341372 RPP25Q9BUL9 199 aaKnown RBP10.84□□□□□ -0.67
TPM3-207ENST00000341372 ATXN3LQ9H3M9 355 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 TASP1Q9H6P5 420 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 DMAP1Q9NPF5 467 aaPredicted RBP10.84□□□□□ -0.67
TPM3-207ENST00000341372 IL37Q9NZH6 218 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 TRHDEQ9UKU6 1024 aa10.84□□□□□ -0.67
TPM3-207ENST00000341372 HELZP42694 1942 aaKnown RBP10.83□□□□□ -0.68
TPM3-207ENST00000341372 FAM92AA1XBS5 289 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 PRR33A8MZF0 331 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 CCDC130P13994 396 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 CD58P19256 250 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 ANXA13P27216 316 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 MAN1A1P33908 653 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 MRE11P49959 708 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 RAD23BP54727 409 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 YWHAEP62258 255 aaKnown RBP10.83□□□□□ -0.68
TPM3-207ENST00000341372 GCNT1Q02742 428 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 STAT4Q14765 748 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 TAF12Q16514 161 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 ARHGAP15Q53QZ3 475 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 STXBP5Q5T5C0 1151 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 ARHGAP17Q68EM7 881 aa10.83□□□□□ -0.68
TPM3-207ENST00000341372 C12orf29Q8N999 325 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms