RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PSMC5P62195 406 aa12.02□□□□□ -0.49
ATXN3-201ENST00000340660 IMMTQ16891 758 aaKnown RBP12.02□□□□□ -0.49
ATXN3-201ENST00000340660 EEF1DP3Q658K8 133 aa12.02□□□□□ -0.49
ATXN3-201ENST00000340660 CHPFQ8IZ52 775 aa12.02□□□□□ -0.49
ATXN3-201ENST00000340660 ARL14EPQ8N8R7 260 aaPredicted RBP12.02□□□□□ -0.49
ATXN3-201ENST00000340660 NSUN7Q8NE18 718 aaKnown RBP12.02□□□□□ -0.49
ATXN3-201ENST00000340660 EVI5LQ96CN4 794 aa12.02□□□□□ -0.49
ATXN3-201ENST00000340660 ZMAT2Q96NC0 199 aaKnown RBP12.02□□□□□ -0.49
ATXN3-201ENST00000340660 MKRN2Q9H000 416 aaKnown RBP12.02□□□□□ -0.49
ATXN3-201ENST00000340660 GCNT4Q9P109 453 aa12.02□□□□□ -0.49
ATXN3-201ENST00000340660 DMGDHQ9UI17 866 aaKnown RBP12.02□□□□□ -0.49
ATXN3-201ENST00000340660 TUBD1Q9UJT1 453 aa12.02□□□□□ -0.49
ATXN3-201ENST00000340660 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.02□□□□□ -0.49
ATXN3-201ENST00000340660 PCDHGA8Q9Y5G5 932 aa12.02□□□□□ -0.49
ATXN3-201ENST00000340660 TRAV19A0A0A6YYK7 116 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 SMCO2A6NFE2 343 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.01□□□□□ -0.49
ATXN3-201ENST00000340660 SCAMP3O14828 347 aaKnown RBP12.01□□□□□ -0.49
ATXN3-201ENST00000340660 TRIM24O15164 1050 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 EDIL3O43854 480 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 IGLV3-19P01714 112 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 NID1P14543 1247 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 MARCKSP29966 332 aaPredicted RBP12.01□□□□□ -0.49
ATXN3-201ENST00000340660 TUFMP49411 452 aaKnown RBP12.01□□□□□ -0.49
ATXN3-201ENST00000340660 BNIP3Q12983 259 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 ORC1Q13415 861 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 MYBPC2Q14324 1141 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 SPNS3Q6ZMD2 512 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 ADAT2Q7Z6V5 191 aaKnown RBP12.01□□□□□ -0.49
ATXN3-201ENST00000340660 ZNF654Q8IZM8 581 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 TMEM130Q8N3G9 435 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 C18orf25Q96B23 403 aaPredicted RBP12.01□□□□□ -0.49
ATXN3-201ENST00000340660 ORAI3Q9BRQ5 295 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 TMEM245Q9H330 911 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 PPME1Q9Y570 386 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 STAB1Q9NY15 2570 aa12.01□□□□□ -0.49
ATXN3-201ENST00000340660 TGFBR3LH3BV60 316 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 M0QZQ0 153 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 VPS4BO75351 444 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 DDAH1O94760 285 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 EDN1P05305 212 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 ADH5P11766 374 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 GLRA2P23416 452 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 OXTRP30559 389 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 ATP2C1P98194 919 aaPredicted RBP12□□□□□ -0.49
ATXN3-201ENST00000340660 DMP1Q13316 513 aaPredicted RBP12□□□□□ -0.49
ATXN3-201ENST00000340660 ISXQ2M1V0 245 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 FUT11Q495W5 492 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 XKR4Q5GH76 650 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 FAM114A1Q8IWE2 563 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 ETFBKMTQ8IXQ9 262 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 SLC34A3Q8N130 599 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 TERB1Q8NA31 727 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 ATXN7L3BQ96GX2 97 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 NUP58Q9BVL2 599 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 VPS4AQ9UN37 437 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 ARHGAP26Q9UNA1 814 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 STK36Q9NRP7 1315 aa12□□□□□ -0.49
ATXN3-201ENST00000340660 MYOFQ9NZM1 2061 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 ARHGAP10A1A4S6 786 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 ERICH2A1L162 156 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 C2orf78A6NCI8 922 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 WASH3PC4AMC7 463 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 VILLO15195 856 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 HNRNPRO43390 633 aaKnown RBP11.99□□□□□ -0.49
ATXN3-201ENST00000340660 TNFSF15O95150 251 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 RXRAP19793 462 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 RPL9P32969 192 aaKnown RBP11.99□□□□□ -0.49
ATXN3-201ENST00000340660 GNAQP50148 359 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 C21orf59P57076 290 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 ZXDCQ2QGD7 858 aaPredicted RBP11.99□□□□□ -0.49
ATXN3-201ENST00000340660 SDE2Q6IQ49 451 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 ALKAL1Q6UXT8 129 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 VASH2Q86V25 355 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 NAT16Q8N8M0 369 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 GALNT11Q8NCW6 608 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 PDCD6IPQ8WUM4 868 aaKnown RBP11.99□□□□□ -0.49
ATXN3-201ENST00000340660 PRIMPOLQ96LW4 560 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 GSX2Q9BZM3 304 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 PCED1AQ9H1Q7 454 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 CASS4Q9NQ75 786 aa11.99□□□□□ -0.49
ATXN3-201ENST00000340660 MAGED2Q9UNF1 606 aaPredicted RBP11.99□□□□□ -0.49
ATXN3-201ENST00000340660 COL27A1Q8IZC6 1860 aaPredicted RBP11.99□□□□□ -0.49
ATXN3-201ENST00000340660 NUMA1Q14980 2115 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 LEFTY2O00292 366 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 TULP3O75386 442 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 WNT1P04628 370 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 ARL2P36404 184 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 GRIK1P39086 918 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 DCAF6Q58WW2 860 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 BORAQ6PGQ7 559 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 TIPARPQ7Z3E1 657 aaKnown RBP11.98□□□□□ -0.49
ATXN3-201ENST00000340660 FAM124AQ86V42 546 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 ARL14Q8N4G2 192 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 OR10T2Q8NGX3 314 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 IGDCC4Q8TDY8 1250 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 HPS3Q969F9 1004 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 BIRC7Q96CA5 298 aa11.98□□□□□ -0.49
ATXN3-201ENST00000340660 ACE2Q9BYF1 805 aaPredicted RBP11.98□□□□□ -0.49
ATXN3-201ENST00000340660 SLC38A7Q9NVC3 462 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms