RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 TXNDC16Q9P2K2 825 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 MRPL42Q9Y6G3 142 aaKnown RBP14.9□□□□□ -0.02
CPSF7-201ENST00000340437 KIAA1217Q5T5P2 1943 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 A0A087WZ62 844 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 IQCF3P0C7M6 154 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 CCDC142Q17RM4 750 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 TMPRSS6Q8IU80 811 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 STKLD1Q8NE28 680 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 FAM149B1Q96BN6 582 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 PGBD4Q96DM1 585 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 PANX3Q96QZ0 392 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 FDXACB1Q9BRP7 624 aaPredicted RBP14.9□□□□□ -0.02
CPSF7-201ENST00000340437 WDR35Q9P2L0 1181 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 PPM1HQ9ULR3 514 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 A6NJR5 290 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 ATG7O95352 703 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 GPD2P43304 727 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 ZNF143P52747 638 aaPredicted RBP14.9□□□□□ -0.02
CPSF7-201ENST00000340437 N4BP2L1Q5TBK1 243 aaPredicted RBP14.9□□□□□ -0.02
CPSF7-201ENST00000340437 LPCAT4Q643R3 524 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 TRIM4Q9C037 500 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 IFT122Q9HBG6 1241 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 USP29Q9HBJ7 922 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 PNPOQ9NVS9 261 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 SLC7A8Q9UHI5 535 aa14.9□□□□□ -0.02
CPSF7-201ENST00000340437 COL4A5P29400 1685 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 HNRNPCL1O60812 293 aaKnown RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 USP12O75317 370 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 ETS2P15036 469 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 ANPEPP15144 967 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 MSX2P35548 267 aaPredicted RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 SLC18A2Q05940 514 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 HSF5Q4G112 596 aaPredicted RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 PMF1Q6P1K2 205 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 PYROXD2Q8N2H3 581 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 TTC16Q8NEE8 873 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 OR6B3Q8NGW1 331 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 NIFKQ9BYG3 293 aaKnown RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 POPDC2Q9HBU9 364 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 XAB2Q9HCS7 855 aaKnown RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 SSU72Q9NP77 194 aaKnown RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 KRT82Q9NSB4 513 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 BTBD7Q9P203 1132 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 TAGLN3Q9UI15 199 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 ANGPTL2Q9UKU9 493 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 RFPL1O75677 317 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 CYP2F1P24903 491 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 PAPOLAP51003 745 aaKnown RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 AP1B1Q10567 949 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 R3HDM1Q15032 1099 aaKnown RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 FGD4Q96M96 766 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 LGMNQ99538 433 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 ZNF184Q99676 751 aaPredicted RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 SLC15A5A6NIM6 579 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 FAM189A1O60320 539 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 PROCP04070 461 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 PTPN7P35236 360 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 MXD4Q14582 209 aaPredicted RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 SURF1Q15526 300 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 CCDC14Q49A88 953 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 PPP1R26Q5T8A7 1209 aaPredicted RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 KCNT2Q6UVM3 1135 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 WDR75Q8IWA0 830 aaKnown RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 TNS4Q8IZW8 715 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 KIF12Q96FN5 646 aa14.89□□□□□ -0.03
CPSF7-201ENST00000340437 APOBEC2Q9Y235 224 aaKnown RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 COL2A1P02458 1487 aaPredicted RBP14.89□□□□□ -0.03
CPSF7-201ENST00000340437 SOWAHBA6NEL2 793 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 MLH1P40692 756 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 PGGT1BP53609 377 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 AP1ARQ63HQ0 302 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 IRGCQ6NXR0 463 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 RASSF3Q86WH2 238 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 OTUD5Q96G74 571 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 RNPEPQ9H4A4 650 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 TLE6Q9H808 572 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 PCDH18Q9HCL0 1135 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 TMPRSS4Q9NRS4 437 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 STX18Q9P2W9 335 aaKnown RBP14.88□□□□□ -0.03
CPSF7-201ENST00000340437 GOLGA8QA0A0J9YX86 632 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 GOLGA8OA6NCC3 632 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 GOLGA8NF8WBI6 632 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 CREB3O43889 395 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 CYP3A5P20815 502 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 AP2B1P63010 937 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 MAP3K10Q02779 954 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 DALRD3Q5D0E6 543 aaKnown RBP14.88□□□□□ -0.03
CPSF7-201ENST00000340437 FAM47CQ5HY64 1035 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 HEATR6Q6AI08 1181 aaKnown RBP14.88□□□□□ -0.03
CPSF7-201ENST00000340437 CHSY1Q86X52 802 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 FAM131BQ86XD5 332 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 PQLC3Q8N755 202 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 NLRP7Q8WX94 980 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 UNKQ9C0B0 810 aaKnown RBP14.88□□□□□ -0.03
CPSF7-201ENST00000340437 ARHGEF4Q9NR80 690 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 KCNK4Q9NYG8 393 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 ACKR2O00590 384 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 NEMP1O14524 444 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 CLGNO14967 610 aa14.88□□□□□ -0.03
CPSF7-201ENST00000340437 CILPO75339 1184 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms