RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 FEZ2Q9UHY8 353 aaPredicted RBP22.04■■□□□ 1.12
VRK2-201ENST00000340157 IGLV3-25P01717 112 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 ITGAVP06756 1048 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 BTG3Q14201 252 aaPredicted RBP22.03■■□□□ 1.12
VRK2-201ENST00000340157 SLC8B1Q6J4K2 584 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 NUP93Q8N1F7 819 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 TTC13Q8NBP0 860 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 FBXO22Q8NEZ5 403 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 DQX1Q8TE96 717 aaKnown RBP22.03■■□□□ 1.12
VRK2-201ENST00000340157 PIK3R5Q8WYR1 880 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 ZBTB9Q96C00 473 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 TMEM121Q9BTD3 319 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 MAK16Q9BXY0 300 aaKnown RBP22.03■■□□□ 1.12
VRK2-201ENST00000340157 DDIT4Q9NX09 232 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 OSER1Q9NX31 292 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 IL37Q9NZH6 218 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 CWC15Q9P013 229 aaKnown RBP22.03■■□□□ 1.12
VRK2-201ENST00000340157 ZNF148Q9UQR1 794 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 WDR27A2RRH5 827 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 PLTPP55058 493 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 EIF4EBP2Q13542 120 aaPredicted RBP22.03■■□□□ 1.12
VRK2-201ENST00000340157 TFDP2Q14188 446 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 SPOUT1Q5T280 376 aaKnown RBP22.03■■□□□ 1.12
VRK2-201ENST00000340157 PSTKQ8IV42 348 aaKnown RBP22.03■■□□□ 1.12
VRK2-201ENST00000340157 SPPL2BQ8TCT7 592 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 ZNF558Q96NG5 402 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 CSPG4P5Q96PW8 444 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 SLC9A7Q96T83 725 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 FRMD8P1Q9BZ68 369 aaPredicted RBP22.03■■□□□ 1.12
VRK2-201ENST00000340157 RRN3Q9NYV6 651 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 ASIC3Q9UHC3 531 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 SCML2Q9UQR0 700 aa22.03■■□□□ 1.12
VRK2-201ENST00000340157 ZSCAN5DPP0CG00 497 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 HAPLN1P10915 354 aaPredicted RBP22.02■■□□□ 1.12
VRK2-201ENST00000340157 ETS1P14921 441 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 GOT1P17174 413 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 ROR1Q01973 937 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 NOMO1Q15155 1222 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 PSMD5Q16401 504 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 MREGQ8N565 214 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 COLGALT1Q8NBJ5 622 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 NTAN1Q96AB6 310 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 OXCT2Q9BYC2 517 aaPredicted RBP22.02■■□□□ 1.12
VRK2-201ENST00000340157 FAM204AQ9H8W3 233 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 VIPAS39Q9H9C1 493 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 FBXW11Q9UKB1 542 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 BACE2Q9Y5Z0 518 aa22.02■■□□□ 1.12
VRK2-201ENST00000340157 A0A1W2PQH9 124 aa22.01■■□□□ 1.11
VRK2-201ENST00000340157 KRT14P02533 472 aa22.01■■□□□ 1.11
VRK2-201ENST00000340157 ADRA1BP35368 520 aa22.01■■□□□ 1.11
VRK2-201ENST00000340157 CXCR3P49682 368 aa22.01■■□□□ 1.11
VRK2-201ENST00000340157 VPS41P49754 854 aa22.01■■□□□ 1.11
VRK2-201ENST00000340157 GDF10P55107 478 aa22.01■■□□□ 1.11
VRK2-201ENST00000340157 SCAPQ12770 1279 aa22.01■■□□□ 1.11
VRK2-201ENST00000340157 DUSP4Q13115 394 aa22.01■■□□□ 1.11
VRK2-201ENST00000340157 ART4Q93070 314 aa22.01■■□□□ 1.11
VRK2-201ENST00000340157 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.01■■□□□ 1.11
VRK2-201ENST00000340157 FAM92AA1XBS5 289 aa22■■□□□ 1.11
VRK2-201ENST00000340157 SPDYE4A6NLX3 237 aa22■■□□□ 1.11
VRK2-201ENST00000340157 C2CD2LO14523 706 aa22■■□□□ 1.11
VRK2-201ENST00000340157 APOL1O14791 398 aa22■■□□□ 1.11
VRK2-201ENST00000340157 SOD2P04179 222 aa22■■□□□ 1.11
VRK2-201ENST00000340157 HSPA9P38646 679 aaKnown RBP22■■□□□ 1.11
VRK2-201ENST00000340157 LMNB2Q03252 620 aa22■■□□□ 1.11
VRK2-201ENST00000340157 SMARCB1Q12824 385 aa22■■□□□ 1.11
VRK2-201ENST00000340157 MGAT5BQ3V5L5 792 aa22■■□□□ 1.11
VRK2-201ENST00000340157 C1orf228Q6PIY5 440 aa22■■□□□ 1.11
VRK2-201ENST00000340157 ZNF365Q70YC5 407 aa22■■□□□ 1.11
VRK2-201ENST00000340157 TRAF3IP1Q8TDR0 691 aaPredicted RBP22■■□□□ 1.11
VRK2-201ENST00000340157 BADQ92934 168 aa22■■□□□ 1.11
VRK2-201ENST00000340157 FMO2Q99518 471 aa22■■□□□ 1.11
VRK2-201ENST00000340157 SEPT5Q99719 369 aaPredicted RBP22■■□□□ 1.11
VRK2-201ENST00000340157 CLSTN3Q9BQT9 956 aa22■■□□□ 1.11
VRK2-201ENST00000340157 ABCC13Q9NSE7 274 aa22■■□□□ 1.11
VRK2-201ENST00000340157 ETNK2Q9NVF9 386 aa22■■□□□ 1.11
VRK2-201ENST00000340157 WHRNQ9P202 907 aa22■■□□□ 1.11
VRK2-201ENST00000340157 MFHAS1Q9Y4C4 1052 aa22■■□□□ 1.11
VRK2-201ENST00000340157 LINC00271P0C7V0 271 aa22■■□□□ 1.11
VRK2-201ENST00000340157 LAG3P18627 525 aa22■■□□□ 1.11
VRK2-201ENST00000340157 EIF3EP60228 445 aaKnown RBP22■■□□□ 1.11
VRK2-201ENST00000340157 B4GALNT4Q76KP1 1039 aa22■■□□□ 1.11
VRK2-201ENST00000340157 GSTA5Q7RTV2 222 aa22■■□□□ 1.11
VRK2-201ENST00000340157 TXLNGYQ9BZA5 131 aa22■■□□□ 1.11
VRK2-201ENST00000340157 FAM72CH0Y354 149 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 F9P00740 461 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 TGM2P21980 687 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 AMPD1P23109 780 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 OR1D2P34982 312 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 DSG1Q02413 1049 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 SEMA3BQ13214 749 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 MTMR3Q13615 1198 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 FAM72AQ5TYM5 149 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 BTBD8Q5XKL5 378 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 FAM72DQ6L9T8 149 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 RHBDF2Q6PJF5 856 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 TMC3Q7Z5M5 1100 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 FAM72BQ86X60 149 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 RNF139Q8WU17 664 aa21.99■■□□□ 1.11
VRK2-201ENST00000340157 C2orf15Q8WU43 125 aaKnown RBP21.99■■□□□ 1.11
VRK2-201ENST00000340157 P3H4Q92791 437 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms