RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 ADAM33Q9BZ11 813 aa18.65■□□□□ 0.58
SDCBP2-201ENST00000339987 FAM204AQ9H8W3 233 aa18.65■□□□□ 0.58
SDCBP2-201ENST00000339987 MARCH2Q9P0N8 246 aa18.65■□□□□ 0.58
SDCBP2-201ENST00000339987 CDH23Q9H251 3354 aa18.64■□□□□ 0.58
SDCBP2-201ENST00000339987 M0QYT0 321 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 IRAK2O43187 625 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 HDCP19113 662 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 TFE3P19532 575 aaPredicted RBP18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 RDXP35241 583 aaKnown RBP18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 SLC7A9P82251 487 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 ATP11AP98196 1134 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 STXBP5Q5T5C0 1151 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 SLFN11Q7Z7L1 901 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 MAB21L3Q8N8X9 362 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 LRRC57Q8N9N7 239 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 FAM172AQ8WUF8 416 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 NACA2Q9H009 215 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 RNF38Q9H0F5 515 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 DDIT4Q9NX09 232 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 SFMBT1Q9UHJ3 866 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 CDH22Q9UJ99 828 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 RASAL2Q9UJF2 1139 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 HBS1LQ9Y450 684 aaKnown RBP18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 CAPN6Q9Y6Q1 641 aa18.64■□□□□ 0.57
SDCBP2-201ENST00000339987 DENND4AQ7Z401 1863 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 GRID2IPA4D2P6 1211 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 MDM4O15151 490 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 RNF8O76064 485 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 KCNA5P22460 613 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 WEE1P30291 646 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 PCK1P35558 622 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 SLC1A1P43005 524 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 KPNA1P52294 538 aaPredicted RBP18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 SMAD4Q13485 552 aaKnown RBP18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 TRIP4Q15650 581 aaPredicted RBP18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 NPAS3Q8IXF0 933 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 SYCE1Q8N0S2 351 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 ARL14EPQ8N8R7 260 aaPredicted RBP18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 ADAM32Q8TC27 787 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 PPM1EQ8WY54 764 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 HLA-CQ95604 372 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 SLC22A12Q96S37 553 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 CALCOCO1Q9P1Z2 691 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 TLR6Q9Y2C9 796 aa18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 USP15Q9Y4E8 981 aaPredicted RBP18.63■□□□□ 0.57
SDCBP2-201ENST00000339987 TMEM110-MUSTN1A8MSY1 372 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 H3BQ06 376 aaPredicted RBP18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 MBL2P11226 248 aaPredicted RBP18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 CXCR3P49682 368 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 HDAC4P56524 1084 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 COG7P83436 770 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 DEUP1Q05D60 604 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 RING1Q06587 406 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 CLUL1Q15846 466 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 CDO1Q16878 200 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 SH3PXD2AQ5TCZ1 1133 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 SND1Q7KZF4 910 aaKnown RBP eCLIP18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 GET4Q7L5D6 327 aaPredicted RBP18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 DAAM2Q86T65 1068 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 ZSCAN30Q86W11 494 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 MIB1Q86YT6 1006 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 CMTM8Q8IZV2 173 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 C17orf53Q8N3J3 647 aaPredicted RBP18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 ARFGAP1Q8N6T3 406 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 ING5Q8WYH8 240 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 FGF13Q92913 245 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 SLC39A13Q96H72 371 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 ALS2CR12Q96Q35 445 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 KLF16Q9BXK1 252 aaPredicted RBP18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 SLITRK6Q9H5Y7 841 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 PIGVQ9NUD9 493 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 GDE1Q9NZC3 331 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 ALG6Q9Y672 507 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 BRWD1Q9NSI6 2320 aa18.62■□□□□ 0.57
SDCBP2-201ENST00000339987 SLC12A8A0AV02 714 aa18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 MSI1O43347 362 aaKnown RBP18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 LRCH4O75427 683 aa18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 PALMO75781 387 aa18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 IGLV3-27P01718 113 aa18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 CKMP06732 381 aa18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 NME3Q13232 169 aa18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 CBX2Q14781 532 aaPredicted RBP18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 CC2D1AQ6P1N0 951 aaPredicted RBP18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 TRIM58Q8NG06 486 aa18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 UBE2Q2Q8WVN8 375 aa18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 ZFRQ96KR1 1074 aaKnown RBP18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 FCRL2Q96LA5 508 aaPredicted RBP18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 CYP2S1Q96SQ9 504 aa18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 POMKQ9H5K3 350 aa18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 CDH7Q9ULB5 785 aa18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 ARHGAP26Q9UNA1 814 aa18.61■□□□□ 0.57
SDCBP2-201ENST00000339987 GRXCR2A6NFK2 248 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 KIF5CO60282 957 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 SLC2A3P11169 496 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 COMTP21964 271 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 AVPR1AP37288 418 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 TBX4P57082 545 aa18.6■□□□□ 0.57
SDCBP2-201ENST00000339987 PPP2R5DQ14738 602 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms