RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 CRY2Q49AN0 593 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 KCTD21Q4G0X4 260 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 FASTKD1Q53R41 847 aaKnown RBP9.71□□□□□ -0.85
NECAP1-201ENST00000339754 MBLAC2Q68D91 279 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 PDPK2PQ6A1A2 396 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 ITPRIPL1Q6GPH6 555 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 POTEAQ6S8J7 498 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 DCDC5Q6ZRR9 648 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 NDUFAF2Q8N183 169 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 DEPTORQ8TB45 409 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 C17orf50Q8WW18 174 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 RSAD2Q8WXG1 361 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 PPP1R10Q96QC0 940 aaKnown RBP9.71□□□□□ -0.85
NECAP1-201ENST00000339754 PKP2Q99959 881 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 TRIM56Q9BRZ2 755 aaKnown RBP9.71□□□□□ -0.85
NECAP1-201ENST00000339754 DHX33Q9H6R0 707 aaKnown RBP9.71□□□□□ -0.85
NECAP1-201ENST00000339754 ARHGAP26Q9UNA1 814 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 TMEM98Q9Y2Y6 226 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 DAGLAQ9Y4D2 1042 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 SMCHD1A6NHR9 2005 aa9.71□□□□□ -0.85
NECAP1-201ENST00000339754 TCRBV5S1A1TA0A578 114 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 SOBPA7XYQ1 873 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 SLC16A4O15374 487 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 TBC1D12O60347 775 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 TOM1L1O75674 476 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 FUCA1P04066 466 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 FGF3P11487 239 aaPredicted RBP9.71□□□□□ -0.86
NECAP1-201ENST00000339754 MYL4P12829 197 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 CD1EP15812 388 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 HSPA13P48723 471 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 NDST2P52849 883 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 BASP1P80723 227 aaKnown RBP9.71□□□□□ -0.86
NECAP1-201ENST00000339754 MRPS22P82650 360 aaKnown RBP9.71□□□□□ -0.86
NECAP1-201ENST00000339754 CYTH1Q15438 398 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 ZNF423Q2M1K9 1284 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 TRIM72Q6ZMU5 477 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 C15orf52Q6ZUT6 534 aaKnown RBP9.71□□□□□ -0.86
NECAP1-201ENST00000339754 FAM71DQ8N9W8 422 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 ZNF516Q92618 1163 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 RTKNQ9BST9 563 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 IFT122Q9HBG6 1241 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 GPRC5CQ9NQ84 441 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 PNPOQ9NVS9 261 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 DNAJC28Q9NX36 388 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 DDX56Q9NY93 547 aaKnown RBP9.71□□□□□ -0.86
NECAP1-201ENST00000339754 IGSF9Q9P2J2 1179 aa9.71□□□□□ -0.86
NECAP1-201ENST00000339754 PRSS51A0A1B0GVH4 220 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 C7orf72A4D263 438 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 FOXD2O60548 495 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 CST8O60676 142 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 ZC3H11AO75152 810 aaKnown RBP eCLIP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 H6PDO95479 791 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 APBA3O96018 575 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 ARP10275 920 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 ZNF26P17031 533 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 PSMC3P17980 439 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 PRKCHP24723 683 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 SLC1A6P48664 564 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 BCAP31P51572 246 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 TXNL4AP83876 142 aaKnown RBP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 CTBSQ01459 385 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 SHROOM1Q2M3G4 852 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 TBC1D10BQ4KMP7 808 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 LGSNQ5TDP6 509 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 VWA5B1Q5TIE3 1220 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 TATDN1Q6P1N9 297 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 DCLRE1AQ6PJP8 1040 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 SIAH1Q8IUQ4 282 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 ZFPM1Q8IX07 1006 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 TMEM102Q8N9M5 508 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 APBB2Q92870 758 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 CCDC97Q96F63 343 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 CFAP36Q96G28 342 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 MPHOSPH6Q99547 160 aaKnown RBP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 SQORQ9Y6N5 450 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 H3BNH8 94 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 ZBTB14O43829 449 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 NCF2P19878 526 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 MMP8P22894 467 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 ARRB2P32121 409 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 CYP24A1Q07973 514 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 KCNJ11Q14654 390 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 MFSD14BQ5SR56 506 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 ZFP1Q6P2D0 407 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 C15orf39Q6ZRI6 1047 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 BBS12Q6ZW61 710 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 TRPC4APQ8TEL6 797 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 NLRP7Q8WX94 980 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 FBXL18Q96ME1 805 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 SORT1Q99523 831 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 FRMD8P1Q9BZ68 369 aaPredicted RBP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 WDR11Q9BZH6 1224 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 OLAHQ9NV23 265 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 EPS15L1Q9UBC2 864 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 EBF1Q9UH73 591 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 SUN2Q9UH99 717 aa9.7□□□□□ -0.86
NECAP1-201ENST00000339754 CNOT11Q9UKZ1 510 aaKnown RBP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 FAM32AQ9Y421 112 aaKnown RBP9.7□□□□□ -0.86
NECAP1-201ENST00000339754 TRDMT1O14717 391 aaKnown RBP9.69□□□□□ -0.86
NECAP1-201ENST00000339754 XPO1O14980 1071 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms